RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 MRGPRX1Q96LB2 322 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 SERPINB11Q96P15 392 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 CIPCQ9C0C6 399 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
GPC1-204ENST00000426280 DCHS1Q96JQ0 3298 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 IGHV1OR15-9A0A0B4J2B8 117 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.21□□□□□ -0.29
GPC1-204ENST00000426280 BCLAF3A2AJT9 711 aaKnown RBP13.21□□□□□ -0.29
GPC1-204ENST00000426280 ALDH1A2O94788 518 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 GJB6O95452 261 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 SERPINC1P01008 464 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 ZNF806P0C7X5 589 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 PABPC1P11940 636 aaKnown RBP13.21□□□□□ -0.29
GPC1-204ENST00000426280 TACR2P21452 398 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 MPLP40238 635 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 CTSOP43234 321 aaPredicted RBP13.21□□□□□ -0.29
GPC1-204ENST00000426280 GABRB2P47870 512 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 SLC11A2P49281 568 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 COPAP53621 1224 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 TPM4P67936 248 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 FMO1Q01740 532 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 CREB5Q02930 508 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 PREPLQ4J6C6 727 aaPredicted RBP13.21□□□□□ -0.29
GPC1-204ENST00000426280 EFHC1Q5JVL4 640 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 MBLAC2Q68D91 279 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.21□□□□□ -0.29
GPC1-204ENST00000426280 OR52K2Q8NGK3 314 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 SLC30A5Q8TAD4 765 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 IGSF8Q969P0 613 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 LOXL4Q96JB6 756 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 NPY6RQ99463 290 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 MAGEB5Q9BZ81 275 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 ASNSD1Q9NWL6 643 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 GGA2Q9UJY4 613 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 CYP8B1Q9UNU6 501 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 SDK1Q7Z5N4 2213 aa13.21□□□□□ -0.29
GPC1-204ENST00000426280 A0A1B0GTH6 734 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 DCDC2BA2VCK2 349 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 SART1O43290 800 aaKnown RBP13.2□□□□□ -0.3
GPC1-204ENST00000426280 DAB1O75553 588 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 ADCY5O95622 1261 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 CYP1A1P04798 512 aaPredicted RBP13.2□□□□□ -0.3
GPC1-204ENST00000426280 GLI1P08151 1106 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 SOX5P35711 763 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 FLT3P36888 993 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 DHPSP49366 369 aaPredicted RBP13.2□□□□□ -0.3
GPC1-204ENST00000426280 BPIFB4P59827 614 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 NOMO3P69849 1222 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 NME3Q13232 169 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 NNTQ13423 1086 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 NAA35Q5VZE5 725 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 SDE2Q6IQ49 451 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 NUDT18Q6ZVK8 323 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 SLC26A9Q7LBE3 791 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 TRMT11Q7Z4G4 463 aaKnown RBP13.2□□□□□ -0.3
GPC1-204ENST00000426280 SLC41A1Q8IVJ1 513 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 APCDD1Q8J025 514 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 CARNMT1Q8N4J0 409 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 TMEM35BQ8NCS4 154 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 ZNF397Q8NF99 534 aaPredicted RBP13.2□□□□□ -0.3
GPC1-204ENST00000426280 FIBINQ8TAL6 211 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 MRGPRX3Q96LB0 322 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 PCMTD1Q96MG8 357 aaPredicted RBP13.2□□□□□ -0.3
GPC1-204ENST00000426280 TBCBQ99426 244 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 RBSNQ9H1K0 784 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 TMEM245Q9H330 911 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 FAM204AQ9H8W3 233 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 FSCN3Q9NQT6 498 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 PIGVQ9NUD9 493 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 TMEM59LQ9UK28 342 aa13.2□□□□□ -0.3
GPC1-204ENST00000426280 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
GPC1-204ENST00000426280 ATXN2Q99700 1313 aaKnown RBP13.19□□□□□ -0.3
GPC1-204ENST00000426280 MED19A0JLT2 244 aaPredicted RBP13.19□□□□□ -0.3
GPC1-204ENST00000426280 GOLGA8SH3BPF8 625 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 M0QYT0 321 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 HSF2BPO75031 334 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 RHOBTB1O94844 696 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 MZF1P28698 734 aaPredicted RBP13.19□□□□□ -0.3
GPC1-204ENST00000426280 NOS2P35228 1153 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 CDK17Q00537 523 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 CENPCQ03188 943 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 PTP4A2Q12974 167 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 NR1I3Q14994 352 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 FILIP1LQ4L180 1135 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 MPP7Q5T2T1 576 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 SH3PXD2AQ5TCZ1 1133 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 FBXL22Q6P050 247 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 CHSY1Q86X52 802 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 ERICH1Q86X53 443 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 CACUL1Q86Y37 369 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 MFN1Q8IWA4 741 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 GPR161Q8N6U8 529 aaKnown RBP13.19□□□□□ -0.3
GPC1-204ENST00000426280 EMC1Q8N766 993 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 NT5C3BQ969T7 300 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 C18orf8Q96DM3 657 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 PDCL3Q9H2J4 239 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms