RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 MEIS3P2A8K0S8 358 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 E7ENQ6 273 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 H0YHG0 523 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 FYNP06241 537 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 NDUFV1P49821 464 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 ACLYP53396 1101 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 ATXN1P54253 815 aaKnown RBP13.98□□□□□ -0.17
LIMS1-205ENST00000410093 WDR4P57081 412 aaKnown RBP13.98□□□□□ -0.17
LIMS1-205ENST00000410093 TPI1P60174 286 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 GAD2Q05329 585 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 DBN1Q16643 649 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 KBTBD12Q3ZCT8 623 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 ACBD5Q5T8D3 534 aaPredicted RBP13.98□□□□□ -0.17
LIMS1-205ENST00000410093 SYPL2Q5VXT5 272 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 ARMC3Q5W041 872 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 STEAP4Q687X5 459 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 ITPRIPL1Q6GPH6 555 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 SLC24A5Q71RS6 500 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 CHSY1Q86X52 802 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 MICALL1Q8N3F8 863 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 LZTR1Q8N653 840 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 C3orf58Q8NDZ4 430 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 CDKL2Q92772 493 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 SIGLEC10Q96LC7 697 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 OSBPL7Q9BZF2 842 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 WDCPQ9H6R7 721 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 ABCC13Q9NSE7 274 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 PIGVQ9NUD9 493 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 FGFR1OP2Q9NVK5 253 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 DONSONQ9NYP3 566 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 FNIP2Q9P278 1114 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 PRKAG3Q9UGI9 489 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 NLRC5Q86WI3 1866 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 A0A1W2PPC1 479 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 FAM159BA6NKW6 160 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 NRP1O14786 923 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 DNAJC8O75937 253 aaPredicted RBP13.97□□□□□ -0.17
LIMS1-205ENST00000410093 ALDH1A2O94788 518 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 METTL18O95568 372 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 IL1BP01584 269 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 ALDH3A1P30838 453 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 RPA3P35244 121 aaPredicted RBP13.97□□□□□ -0.17
LIMS1-205ENST00000410093 FAM189BP81408 668 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 SLC20A2Q08357 652 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 PPIDQ08752 370 aaKnown RBP13.97□□□□□ -0.17
LIMS1-205ENST00000410093 IFRD2Q12894 506 aaPredicted RBP13.97□□□□□ -0.17
LIMS1-205ENST00000410093 NME3Q13232 169 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 TIFABQ6ZNK6 161 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 CAPN12Q6ZSI9 719 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 DCP1BQ8IZD4 617 aaKnown RBP13.97□□□□□ -0.17
LIMS1-205ENST00000410093 ARHGAP18Q8N392 663 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 COLGALT1Q8NBJ5 622 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 GDAP1Q8TB36 358 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 HDAC11Q96DB2 347 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 P2RY11Q96G91 374 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 FUBP3Q96I24 572 aaKnown RBP eCLIP13.97□□□□□ -0.17
LIMS1-205ENST00000410093 APOPT1Q96IL0 206 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 HAPLN3Q96S86 360 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 DDIT4Q9NX09 232 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.97□□□□□ -0.172e-8■■□□□ 13.8
LIMS1-205ENST00000410093 PHF24Q9UPV7 400 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 TTLL3Q9Y4R7 772 aa13.97□□□□□ -0.17
LIMS1-205ENST00000410093 MAGEB16A2A368 324 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 CFAP73A6NFT4 308 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 RNF103O00237 685 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 TRIM66O15016 1216 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 CREB3O43889 395 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 MFSD11O43934 449 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 MGEA5O60502 916 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 BANF1O75531 89 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 ATP5HO75947 161 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 USP17L7P0C7H9 530 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 SKIV2L2P42285 1042 aaKnown RBP13.96□□□□□ -0.17
LIMS1-205ENST00000410093 LIG3P49916 1009 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 AP1B1Q10567 949 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 MTA1Q13330 715 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 NFE2Q16621 373 aaPredicted RBP13.96□□□□□ -0.17
LIMS1-205ENST00000410093 TTC31Q49AM3 519 aaPredicted RBP13.96□□□□□ -0.17
LIMS1-205ENST00000410093 STXBP5Q5T5C0 1151 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 FYB2Q5VWT5 728 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 SPATA2LQ8IUW3 424 aaPredicted RBP13.96□□□□□ -0.17
LIMS1-205ENST00000410093 LRRC49Q8IUZ0 686 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 IGDCC3Q8IVU1 814 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 ACMSDQ8TDX5 336 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 STAMBPL1Q96FJ0 436 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 CFAP36Q96G28 342 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 RTP3Q9BQQ7 232 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 OXCT2Q9BYC2 517 aaPredicted RBP13.96□□□□□ -0.17
LIMS1-205ENST00000410093 UBE2OQ9C0C9 1292 aaKnown RBP13.96□□□□□ -0.17
LIMS1-205ENST00000410093 ELAC1Q9H777 363 aaKnown RBP13.96□□□□□ -0.17
LIMS1-205ENST00000410093 RXFP1Q9HBX9 757 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 PRDM5Q9NQX1 630 aaPredicted RBP13.96□□□□□ -0.17
LIMS1-205ENST00000410093 STARD7Q9NQZ5 370 aa13.96□□□□□ -0.17
LIMS1-205ENST00000410093 A0A1W2PPM1 405 aa13.95□□□□□ -0.18
LIMS1-205ENST00000410093 SYN3O14994 580 aa13.95□□□□□ -0.18
LIMS1-205ENST00000410093 FGF10O15520 208 aaPredicted RBP13.95□□□□□ -0.18
LIMS1-205ENST00000410093 LPXNO60711 386 aa13.95□□□□□ -0.18
LIMS1-205ENST00000410093 SPAG7O75391 227 aa13.95□□□□□ -0.18
LIMS1-205ENST00000410093 POMCP01189 267 aa13.95□□□□□ -0.18
LIMS1-205ENST00000410093 IGLV3-25P01717 112 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms