RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PKN3Q6P5Z2 889 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 STRADAQ7RTN6 431 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 FAM131BQ86XD5 332 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 RPLP0P6Q8NHW5 317 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 KCNV2Q8TDN2 545 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 ZNF653Q96CK0 615 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 MYEOVQ96EZ4 313 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 ANLNQ9NQW6 1124 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 PRMT8Q9NR22 394 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 CNOT8Q9UFF9 292 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 STARD13Q9Y3M8 1113 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 HS3ST4Q9Y661 456 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 I6L893 689 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 CHRM1P11229 460 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 KIR2DL1P43626 348 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 PTPN5P54829 565 aa20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 AUHQ13825 339 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 ASTE1Q2TB18 679 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 C2orf27AQ580R0 203 aa20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 FBXL22Q6P050 247 aa20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 ZNF557Q8N988 423 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 C1orf74Q96LT6 269 aa20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 CNPY3Q9BT09 278 aa20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 IRF2BPLQ9H1B7 796 aa20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 RAPGEFL1Q9UHV5 662 aa20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 FBXO4Q9UKT5 387 aa20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 SCINQ9Y6U3 715 aa20.53■□□□□ 0.88
PDLIM2-207ENST00000409417 ATG2BQ96BY7 2078 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 PRRT4C9JH25 899 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 PAPSS2O95340 614 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 HDAC4P56524 1084 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 SATB1Q01826 763 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 SLC18A3Q16572 532 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 HSF5Q4G112 596 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 CCDC122Q5T0U0 273 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 EMC10Q5UCC4 262 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 ANKS1BQ7Z6G8 1248 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 CFAP52Q8N1V2 620 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 FAM172AQ8WUF8 416 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 ACDQ96AP0 544 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 HAPLN3Q96S86 360 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 SIK2Q9H0K1 926 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 MRPL47Q9HD33 250 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 C2orf42Q9NWW7 574 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 STIM2Q9P246 746 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 NENFQ9UMX5 172 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 KIAA1549LQ6ZVL6 1849 aa20.52■□□□□ 0.88
PDLIM2-207ENST00000409417 ANTXRLA6NF34 631 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 TMEM191CA6NGB0 347 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 H0Y858 1186 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 HLA-FP30511 346 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 GFPT1Q06210 699 aaPredicted RBP20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 RAB6CQ53S08 254 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 RABGAP1LQ5R372 815 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 TTC39BQ5VTQ0 682 aaPredicted RBP20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 SYT13Q7L8C5 426 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 TC2NQ8N9U0 490 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 IL17RCQ8NAC3 791 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 FIBINQ8TAL6 211 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 FNIP1Q8TF40 1166 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 CHP1Q99653 195 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 RAB6CQ9H0N0 254 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 DEF6Q9H4E7 631 aa20.51■□□□□ 0.87
PDLIM2-207ENST00000409417 CCP110O43303 1012 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 AKR1B10O60218 316 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 DESP17661 470 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 ADRA1BP35368 520 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 TIE1P35590 1138 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 OGDHQ02218 1023 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 CSTF1Q05048 431 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 EIF4HQ15056 248 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 GEN1Q17RS7 908 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 ZNF528Q3MIS6 628 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 ARL13BQ3SXY8 428 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 MFN1Q8IWA4 741 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 CCDC117Q8IWD4 279 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 ZNF513Q8N8E2 541 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 CCDC42Q96M95 316 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 RPRD1AQ96P16 312 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 THAP2Q9H0W7 228 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 NHEJ1Q9H9Q4 299 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 TMPRSS4Q9NRS4 437 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 ABCB8Q9NUT2 735 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 MYO1AQ9UBC5 1043 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 HCN2Q9UL51 889 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 VANGL2Q9ULK5 521 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 TIMM44O43615 452 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 LUC7L3O95232 432 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 CDH18Q13634 790 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 C5orf22Q49AR2 442 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 C14orf80Q86SX3 495 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 CARNMT1Q8N4J0 409 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 ALLCQ8N6M5 410 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 WFDC5Q8TCV5 224 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 IGSF8Q969P0 613 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 ELOVL2Q9NXB9 296 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 GGA2Q9UJY4 613 aa20.5■□□□□ 0.87
PDLIM2-207ENST00000409417 MYO18AQ92614 2054 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 A0A1B0GVM2 712 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms