RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 NDRG1Q92597 394 aaKnown RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 EDEM1Q92611 657 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 ERLEC1Q96DZ1 483 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 CALR3Q96L12 384 aaKnown RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 KREMEN1Q96MU8 473 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 NOX5Q96PH1 765 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 RTKNQ9BST9 563 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 DCLK3Q9C098 648 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 SMOC1Q9H4F8 434 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 MARK1Q9P0L2 795 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 PCDHGA5Q9Y5G8 931 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 DDX3XO00571 662 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 GDF9O60383 454 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 ADAM23O75077 832 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 KRT5P13647 590 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 HNRNPLP14866 589 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 WHAMMP3Q1A5X7 153 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 EGFLAMQ63HQ2 1017 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 IL31Q6EBC2 164 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 Q6ZNB5 142 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 UBR7Q8N806 425 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 RLN3Q8WXF3 142 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 GOLGA1Q92805 767 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 ZC3H10Q96K80 434 aaKnown RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 AGPAT1Q99943 283 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 DUSP15Q9H1R2 295 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 OLA1Q9NTK5 396 aaKnown RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 KIAA1257Q9ULG3 409 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 JRKLQ9Y4A0 524 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 A0A0A0MRY4 1105 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 MED19A0JLT2 244 aaPredicted RBP12□□□□□ -0.49
CDRT1-202ENST00000354433 MACROD2A1Z1Q3 448 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 MAP3K13O43283 966 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 KLKB1P03952 638 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 H2AFZP0C0S5 128 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 PRLRP16471 622 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 TNFAIP3P21580 790 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 BCKDHBP21953 392 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 NTSR1P30989 418 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 DHPSP49366 369 aaPredicted RBP12□□□□□ -0.49
CDRT1-202ENST00000354433 HARS2P49590 506 aaKnown RBP12□□□□□ -0.49
CDRT1-202ENST00000354433 BPIFB4P59827 614 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 STILQ15468 1287 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 PM20D1Q6GTS8 502 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 LCLAT1Q6UWP7 414 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 H2AFVQ71UI9 128 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 ARMCX6Q7L4S7 300 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 ZNF276Q8N554 614 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 CEP112Q8N8E3 955 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 OLIG1Q8TAK6 271 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 KCNV2Q8TDN2 545 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 DDI1Q8WTU0 396 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 TFAP2BQ92481 460 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 PLD4Q96BZ4 506 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 CNGB3Q9NQW8 809 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 ST7Q9NRC1 585 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 VPS45Q9NRW7 570 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 SFMBT1Q9UHJ3 866 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 AGO1Q9UL18 857 aaKnown RBP12□□□□□ -0.49
CDRT1-202ENST00000354433 WDR3Q9UNX4 943 aaKnown RBP eCLIP12□□□□□ -0.49
CDRT1-202ENST00000354433 TFR2Q9UP52 801 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 DUSP10Q9Y6W6 482 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 KIAA1549LQ6ZVL6 1849 aa12□□□□□ -0.49
CDRT1-202ENST00000354433 YJEFN3A6XGL0 299 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 EFCAB8A8MWE9 144 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 E7ENQ6 273 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 CALCAP01258 141 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 ZNF806P0C7X5 589 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 PNMA6AP0CW24 399 aaPredicted RBP11.99□□□□□ -0.49
CDRT1-202ENST00000354433 GZMAP12544 262 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 BSPRYQ5W0U4 402 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 PMS2CLQ68D20 193 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 TCEAL6Q6IPX3 200 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 CYP2U1Q7Z449 544 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 ZNF677Q86XU0 584 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 MNS1Q8NEH6 495 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 UBE2Q2Q8WVN8 375 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 KCTD13Q8WZ19 329 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 TCEAL3Q969E4 200 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 MIS12Q9H081 205 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 ABCC13Q9NSE7 274 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 CACNA2D2Q9NY47 1150 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 NOCTQ9UK39 431 aaKnown RBP11.99□□□□□ -0.49
CDRT1-202ENST00000354433 STARD13Q9Y3M8 1113 aa11.99□□□□□ -0.49
CDRT1-202ENST00000354433 PRRT4C9JH25 899 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 SLC30A4O14863 429 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 MSI1O43347 362 aaKnown RBP11.98□□□□□ -0.49
CDRT1-202ENST00000354433 MOCS3O95396 460 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 TMEM253P0C7T8 217 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 DAOAP59103 153 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 BYSLQ13895 437 aaKnown RBP11.98□□□□□ -0.49
CDRT1-202ENST00000354433 TCEAL1Q15170 157 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 CNGA2Q16280 664 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 FYB2Q5VWT5 728 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 PMF1Q6P1K2 205 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 LPCAT2Q7L5N7 544 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 BHLHA9Q7RTU4 235 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 ANKS1BQ7Z6G8 1248 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 EPS8L1Q8TE68 723 aa11.98□□□□□ -0.49
CDRT1-202ENST00000354433 UCMAQ8WVF2 138 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms