RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 GDE1Q9NZC3 331 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 SFMBT1Q9UHJ3 866 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 NAALADL1Q9UQQ1 740 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 CEP83Q9Y592 693 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ZNF318Q5VUA4 2279 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 EML5Q05BV3 1969 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 CKAP5Q14008 2032 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 KMT2EQ8IZD2 1858 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 C2CD4BA6NLJ0 364 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 SIGLEC16A6NMB1 481 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 LEFTY2O00292 366 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ARNTLO00327 626 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 SCAMP3O14828 347 aaKnown RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 HSF2BPO75031 334 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 NDUFA10O95299 355 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 IGLV3-27P01718 113 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 KLKB1P03952 638 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 CYP1A2P05177 515 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 CALB1P05937 261 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ASGR2P07307 311 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ABCB4P21439 1286 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 DDX6P26196 483 aaKnown RBP eCLIP6.15□□□□□ -1.42
SSX3-201ENST00000298396 GBP2P32456 591 aaPredicted RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 RFC1P35251 1148 aaPredicted RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 PPP3CCP48454 512 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ATXN1P54253 815 aaKnown RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 YWHAZP63104 245 aaKnown RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 EFEMP1Q12805 493 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 C15orf59Q2T9L4 293 aaPredicted RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 C10orf120Q5SQS8 335 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 CCDC122Q5T0U0 273 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 KLHDC10Q6PID8 442 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 DNAJC14Q6Y2X3 702 aaPredicted RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 SLCO4C1Q6ZQN7 724 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 TOGARAM2Q6ZUX3 1019 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 BEND5Q7L4P6 421 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 LRRC8AQ8IWT6 810 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ADHFE1Q8IWW8 467 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ZDHHC14Q8IZN3 488 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 DEFB106AQ8N104 65 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ARFGAP1Q8N6T3 406 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 TDRD5Q8NAT2 981 aaKnown RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 C3orf20Q8ND61 904 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 IPO4Q8TEX9 1081 aaKnown RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 ATXN2LQ8WWM7 1075 aaKnown RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 MRPS31Q92665 395 aaKnown RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 SMARCD2Q92925 531 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 FAM149B1Q96BN6 582 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ZNF653Q96CK0 615 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 CHFRQ96EP1 664 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 MYEOVQ96EZ4 313 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 SLC39A13Q96H72 371 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 VCPIP1Q96JH7 1222 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 BTBD6Q96KE9 485 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 RPGRIP1Q96KN7 1286 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 FCRL2Q96LA5 508 aaPredicted RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 NOX5Q96PH1 765 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 GCNAQ96QF7 691 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 TBCBQ99426 244 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 NPY6RQ99463 290 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 BAG1Q99933 345 aaPredicted RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 DESI2Q9BSY9 194 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 DDX23Q9BUQ8 820 aaKnown RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 LACRTQ9GZZ8 138 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 POPDC2Q9HBU9 364 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ANLNQ9NQW6 1124 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 SMPD4Q9NXE4 827 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.15□□□□□ -1.42
SSX3-201ENST00000298396 CNOT8Q9UFF9 292 aaKnown RBP6.15□□□□□ -1.42
SSX3-201ENST00000298396 SALL4Q9UJQ4 1053 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 ARHGAP26Q9UNA1 814 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 CPQQ9Y646 472 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 NUMBLQ9Y6R0 609 aa6.15□□□□□ -1.42
SSX3-201ENST00000298396 TRAV19A0A0A6YYK7 116 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 ANKRD62A6NC57 917 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 TMEM191CA6NGB0 347 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 OTOL1A6NHN0 477 aaPredicted RBP6.14□□□□□ -1.43
SSX3-201ENST00000298396 SHISA7A6NL88 538 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 ADARB2-AS1A8MUL3 147 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 HEPACAM2A8MVW5 462 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 EIF3CLB5ME19 914 aaKnown RBP6.14□□□□□ -1.43
SSX3-201ENST00000298396 GFRA2O00451 464 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 IRAK2O43187 625 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 SART1O43290 800 aaKnown RBP6.14□□□□□ -1.43
SSX3-201ENST00000298396 CCP110O43303 1012 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 NDUFB5O43674 189 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 NARSO43776 548 aaKnown RBP6.14□□□□□ -1.43
SSX3-201ENST00000298396 AKR1B10O60218 316 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 ECI2O75521 394 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 STC2O76061 302 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 TRUB2O95900 331 aaKnown RBP6.14□□□□□ -1.43
SSX3-201ENST00000298396 CKMP06732 381 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 GLI1P08151 1106 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 HMBSP08397 361 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 TMEM253P0C7T8 217 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 IRF1P10914 325 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 MBL2P11226 248 aaPredicted RBP6.14□□□□□ -1.43
SSX3-201ENST00000298396 BMP4P12644 408 aa6.14□□□□□ -1.43
SSX3-201ENST00000298396 NCAM1P13591 858 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms