RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 HCFC1R1Q9NWW0 138 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 UXTQ9UBK9 157 aaPredicted RBP19.18■□□□□ 0.66
SNX17-201ENST00000233575 REV3LO60673 3130 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.18■□□□□ 0.66
SNX17-201ENST00000233575 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.18■□□□□ 0.66
SNX17-201ENST00000233575 EPOPA6NHQ4 379 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 TP73O15350 636 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 ERLIN1O75477 346 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 SLC2A3P11169 496 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 GJA1P17302 382 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 GABRR2P28476 465 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 IRAK1P51617 712 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 MLLT6P55198 1093 aaPredicted RBP19.18■□□□□ 0.66
SNX17-201ENST00000233575 CYP4F8P98187 520 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 CUL1Q13616 776 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 MS4A13Q5J8X5 152 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 TXNDC8Q6A555 127 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 ZDHHC24Q6UX98 284 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 OLFM3Q96PB7 478 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 CDK5RAP1Q96SZ6 601 aaKnown RBP19.18■□□□□ 0.66
SNX17-201ENST00000233575 TRPC7Q9HCX4 862 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 FAM114A2Q9NRY5 505 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 ASB3Q9Y575 518 aa19.18■□□□□ 0.66
SNX17-201ENST00000233575 E9PAM4 449 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 RBL1P28749 1068 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 LMNB2Q03252 620 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 RING1Q06587 406 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 PAFAH1B3Q15102 231 aaKnown RBP19.17■□□□□ 0.66
SNX17-201ENST00000233575 PPM1LQ5SGD2 360 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 PPP2R2DQ66LE6 453 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 KLHDC10Q6PID8 442 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 SYDE1Q6ZW31 735 aaPredicted RBP19.17■□□□□ 0.66
SNX17-201ENST00000233575 GDPD5Q8WTR4 605 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 WBP2Q969T9 261 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 CORO1BQ9BR76 489 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 USP29Q9HBJ7 922 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 ZDHHC18Q9NUE0 388 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 MPP6Q9NZW5 540 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 VANGL2Q9ULK5 521 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 NUP205Q92621 2012 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 DENND4CQ5VZ89 1909 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 GOLGA6L7A0A1B0GV03 622 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 ADCY8P40145 1251 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 NR2C2P49116 596 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 TUBP50607 506 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 DRG2P55039 364 aaKnown RBP19.17■□□□□ 0.66
SNX17-201ENST00000233575 PLTPP55058 493 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 RAP1GAP2Q684P5 730 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 TADA2BQ86TJ2 420 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 ZNF683Q8IZ20 524 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 FBXO25Q8TCJ0 367 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 RSAD2Q8WXG1 361 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 MYEOVQ96EZ4 313 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 BTN2A3PQ96KV6 586 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 LGMNQ99538 433 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 NDFIP2Q9NV92 336 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 SMPD4Q9NXE4 827 aa19.17■□□□□ 0.66
SNX17-201ENST00000233575 HBS1LQ9Y450 684 aaKnown RBP19.17■□□□□ 0.66
SNX17-201ENST00000233575 HOXC13P31276 330 aa19.16■□□□□ 0.66
SNX17-201ENST00000233575 PPP3CCP48454 512 aa19.16■□□□□ 0.66
SNX17-201ENST00000233575 AUHQ13825 339 aaKnown RBP19.16■□□□□ 0.66
SNX17-201ENST00000233575 STXBP5Q5T5C0 1151 aa19.16■□□□□ 0.66
SNX17-201ENST00000233575 ZNF697Q5TEC3 545 aa19.16■□□□□ 0.66
SNX17-201ENST00000233575 NADSYN1Q6IA69 706 aa19.16■□□□□ 0.66
SNX17-201ENST00000233575 TAB3Q8N5C8 712 aaPredicted RBP19.16■□□□□ 0.66
SNX17-201ENST00000233575 ATP6V0D2Q8N8Y2 350 aa19.16■□□□□ 0.66
SNX17-201ENST00000233575 C1orf74Q96LT6 269 aa19.16■□□□□ 0.66
SNX17-201ENST00000233575 A0A1W2PRU2 124 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 KCNN4O15554 427 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 KLKB1P03952 638 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 IRF1P10914 325 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 MYL4P12829 197 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 CCR2P41597 374 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 ZNF135P52742 658 aaPredicted RBP19.15■□□□□ 0.66
SNX17-201ENST00000233575 ZXDBP98169 803 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 P3H1Q32P28 736 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 ARL14EPQ8N8R7 260 aaPredicted RBP19.15■□□□□ 0.66
SNX17-201ENST00000233575 CCDC89Q8N998 374 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 TBC1D31Q96DN5 1066 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 CELF6Q96J87 481 aaKnown RBP19.15■□□□□ 0.66
SNX17-201ENST00000233575 KLC2Q9H0B6 622 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 HCFC2Q9Y5Z7 792 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 RFXAPO00287 272 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 SCAMP3O14828 347 aaKnown RBP19.15■□□□□ 0.66
SNX17-201ENST00000233575 STC2O76061 302 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 VAV1P15498 845 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 NRG1Q02297 640 aaPredicted RBP19.15■□□□□ 0.66
SNX17-201ENST00000233575 GPS1Q13098 491 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 MAP9Q49MG5 647 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 SLC45A4Q5BKX6 768 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 NUGGCQ68CJ6 796 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 IGSF8Q969P0 613 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 SNF8Q96H20 258 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 ZFRQ96KR1 1074 aaKnown RBP19.15■□□□□ 0.66
SNX17-201ENST00000233575 QKIQ96PU8 341 aaKnown RBP eCLIP19.15■□□□□ 0.669e-9■■□□□ 14.4
SNX17-201ENST00000233575 PRMT1Q99873 361 aaKnown RBP19.15■□□□□ 0.66
SNX17-201ENST00000233575 KLF16Q9BXK1 252 aaPredicted RBP19.15■□□□□ 0.66
SNX17-201ENST00000233575 PRDM12Q9H4Q4 367 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 PCDH9Q9HC56 1237 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 SLC12A6Q9UHW9 1150 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms