RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 DFFAO00273 331 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 ZNF865P0CJ78 1059 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 SETSIPP0DME0 302 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 SERPINB3P29508 390 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 SERPINB4P48594 390 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 XRCC4Q13426 336 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 LGSNQ5TDP6 509 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 SDHAF4Q5VUM1 108 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 KIAA0319Q5VV43 1072 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 CLEC20AQ6ZU45 233 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 TDRPQ86YL5 185 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 NUDCD3Q8IVD9 361 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 SLC44A1Q8WWI5 657 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 PCED1BQ96HM7 432 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 PPP1R36Q96LQ0 422 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 FERMT1Q9BQL6 677 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 SHCBP1LQ9BZQ2 653 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 DNAI2Q9GZS0 605 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 POPDC2Q9HBU9 364 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 MTMR10Q9NXD2 777 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 MCM8Q9UJA3 840 aa11.89□□□□□ -0.51
ARHGEF1-220ENST00000600274 H3BRJ5 948 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 DNAJC8O75937 253 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 APOEP02649 317 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 OR4Q2P0C623 313 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 MRPS5P82675 430 aaKnown RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 TAZQ16635 292 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 TTC39BQ5VTQ0 682 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 ZNF467Q7Z7K2 595 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 TTC7BQ86TV6 843 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 BANPQ8N9N5 519 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 C3orf58Q8NDZ4 430 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 OR52K1Q8NGK4 314 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 AZIN2Q96A70 460 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 DUSP16Q9BY84 665 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 FAM105AQ9NUU6 356 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 MDM4O15151 490 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 KRT38O76015 456 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 MYL2P10916 166 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 ERCC2P18074 760 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 KCNA4P22459 653 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 PNPLA4P41247 253 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 ACADSBP45954 432 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 CRYBB1P53674 252 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 GSCP56915 257 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 MXRA7P84157 204 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 PLEKHG4Q58EX7 1191 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 SLC9A4Q6AI14 798 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 CRTAC1Q9NQ79 661 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 PPARGC1AQ9UBK2 798 aaKnown RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 RPS6KL1Q9Y6S9 549 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 OAS1P00973 400 aaKnown RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 AMHP03971 560 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 GNAT1P11488 350 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 RPL10AP62906 217 aaKnown RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 BNIP1Q12981 228 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 DPYSL2Q16555 572 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 EML3Q32P44 896 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 SLC25A52Q3SY17 297 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 CST9Q5W186 159 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 GBP7Q8N8V2 638 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 ZNF669Q96BR6 464 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 APOPT1Q96IL0 206 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 ATXN3LQ9H3M9 355 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 TMEM30AQ9NV96 361 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 ZFATQ9P243 1243 aa11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 ABT1Q9ULW3 272 aaKnown RBP11.88□□□□□ -0.51
ARHGEF1-220ENST00000600274 E7ESA3 106 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 ENDOD1O94919 500 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 PPM1JQ5JR12 505 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 ARHGAP17Q68EM7 881 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 GDF6Q6KF10 455 aaPredicted RBP11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 LONP2Q86WA8 852 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 TEKT4Q8WW24 435 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 GRAMD1AQ96CP6 724 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 TMEM120AQ9BXJ8 343 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 AGO3Q9H9G7 860 aaKnown RBP11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 PRG3Q9Y2Y8 225 aaPredicted RBP11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 BCLAF3A2AJT9 711 aaKnown RBP11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 XPO1O14980 1071 aaKnown RBP11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 JCHAINP01591 159 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 ZFXP17010 805 aaPredicted RBP11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 RGS2P41220 211 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 CMC1Q7Z7K0 106 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 FAM35AQ86V20 835 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 ALYREFQ86V81 257 aaKnown RBP11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 RASSF3Q86WH2 238 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 CRYBG2Q8N1P7 616 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 ANKLE1Q8NAG6 615 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 SCAMP5Q8TAC9 235 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 GPR152Q8TDT2 470 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 TMEM209Q96SK2 561 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 EBNA1BP2Q99848 306 aaKnown RBP11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 TKTL2Q9H0I9 626 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 TXLNGQ9NUQ3 528 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 IRAK4Q9NWZ3 460 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 SYBUQ9NX95 663 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 ZMYND8Q9ULU4 1186 aaPredicted RBP11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 STARD13Q9Y3M8 1113 aa11.87□□□□□ -0.51
ARHGEF1-220ENST00000600274 PSAT1Q9Y617 370 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms