RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SDK1	Q7Z5N4	2213 aa		13.08	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	LRRC10B	A6NIK2	292 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	DCLK1	O15075	740 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	MAP3K13	O43283	966 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	SYNCRIP	O60506	623 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	LSM8	O95777	96 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CAVIN2	O95810	425 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	TRUB2	O95900	331 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ATP5B	P06576	529 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CYP11B1	P15538	503 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	APBA1	Q02410	837 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ARID5A	Q03989	594 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	FAM133B	Q5BKY9	247 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	SYPL2	Q5VXT5	272 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	DGLUCY	Q7Z3D6	616 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	RABEPK	Q7Z6M1	372 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	TAC4	Q86UU9	113 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	SLC47A2	Q86VL8	602 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ZNF677	Q86XU0	584 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	KDM1B	Q8NB78	822 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	MSANTD4	Q8NCY6	345 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	FIBIN	Q8TAL6	211 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CPXM1	Q96SM3	734 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ACOX2	Q99424	681 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CACNA2D2	Q9NY47	1150 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CALCOCO1	Q9P1Z2	691 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	GGA2	Q9UJY4	613 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	PLA2G4C	Q9UP65	541 aa		13.07	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	TSPAN3	O60637	253 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	DLD	P09622	509 aa	Known RBP	13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	PABPC1	P11940	636 aa	Known RBP	13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	NDUFV2	P19404	249 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	HLA-F	P30511	346 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CCR1	P32246	355 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	NOS2	P35228	1153 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	OXCT1	P55809	520 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	SLC6A3	Q01959	620 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CREB5	Q02930	508 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	RAPGEF1	Q13905	1077 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ZNF234	Q14588	700 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	KRT31	Q15323	416 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	AASDH	Q4L235	1098 aa	Predicted RBP	13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	HSP90AA4P	Q58FG1	418 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	DCAF6	Q58WW2	860 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	MS4A13	Q5J8X5	152 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	OLFML1	Q6UWY5	402 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CYP2U1	Q7Z449	544 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ATP6V0D2	Q8N8Y2	350 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	MRGPRX1	Q96LB2	322 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CIPC	Q9C0C6	399 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	NAT10	Q9H0A0	1025 aa	Known RBP	13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	PDCL3	Q9H2J4	239 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	SYNC	Q9H7C4	482 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	EVL	Q9UI08	416 aa	Predicted RBP	13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CLEC4E	Q9ULY5	219 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	PAXBP1	Q9Y5B6	917 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	FHOD1	Q9Y613	1164 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ABCA7	Q8IZY2	2146 aa		13.06	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	THADA	Q6YHU6	1953 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	KCNU1	A8MYU2	1149 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708		F8VZ95	297 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	TBL1X	O60907	577 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	DAB1	O75553	588 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ASL	P04424	464 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ABCB4	P21439	1286 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	BCKDHB	P21953	392 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	OXTR	P30559	389 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	IL12RB1	P42701	662 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	WAS	P42768	502 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	GABRB2	P47870	512 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ATXN1	P54253	815 aa	Known RBP	13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ZBTB16	Q05516	673 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	SLC12A1	Q13621	1099 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	FUT11	Q495W5	492 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	TMEM215	Q68D42	235 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	NADSYN1	Q6IA69	706 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	KIAA1211L	Q6NV74	962 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	RFWD3	Q6PCD5	774 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	SERPINA13P	Q6UXR4	307 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	CHST9	Q7L1S5	443 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ARC	Q7LC44	396 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ADIPOR2	Q86V24	386 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	SYT12	Q8IV01	421 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	PASD1	Q8IV76	773 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	FOXJ1	Q92949	421 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	PPP1R9B	Q96SB3	815 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	LSM14B	Q9BX40	385 aa	Known RBP	13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	TMEM245	Q9H330	911 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ZDHHC4	Q9NPG8	344 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	ABCB8	Q9NUT2	735 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	FANCL	Q9NW38	375 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	TAB2	Q9NYJ8	693 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	TJP2	Q9UDY2	1190 aa		13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	LIMA1	Q9UHB6	759 aa	Known RBP	13.05	□□□□□ -0.32
CDK5RAP3-222	ENST00000581708	MBD1	Q9UIS9	605 aa	Predicted RBP	13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms