RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CHST9Q7L1S5 443 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 PLEKHO2Q8TD55 490 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 IMPG2Q9BZV3 1241 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 TMEM245Q9H330 911 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 AASDHPPTQ9NRN7 309 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 SUN2Q9UH99 717 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 A0A1W2PPC4 97 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 ASPAP45381 313 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 ARRB1P49407 418 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 HARS2P49590 506 aaKnown RBP18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 ZNF445P59923 1031 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 CLDN10P78369 228 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 PDE4CQ08493 712 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 PRAMEF14Q5SWL7 426 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 SPOPLQ6IQ16 392 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 UNC13DQ70J99 1090 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 AHI1Q8N157 1196 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 EID2Q8N6I1 236 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 IQUBQ8NA54 791 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 PLD4Q96BZ4 506 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 TMEM176AQ96HP8 235 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 SLC6A18Q96N87 628 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 ARID3AQ99856 593 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 DUSP16Q9BY84 665 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 SLC39A2Q9NP94 309 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 PRSS16Q9NQE7 514 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 GDF3Q9NR23 364 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 SCML1Q9UN30 329 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 USP3Q9Y6I4 520 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 PLXNA2O75051 1894 aa18.62■□□□□ 0.57
TSPAN3-208ENST00000560514 RNASEH1O60930 286 aaKnown RBP18.61■□□□□ 0.57
TSPAN3-208ENST00000560514 HLA-FP30511 346 aa18.61■□□□□ 0.57
TSPAN3-208ENST00000560514 ACADVLP49748 655 aa18.61■□□□□ 0.57
TSPAN3-208ENST00000560514 CCDC173Q0VFZ6 552 aa18.61■□□□□ 0.57
TSPAN3-208ENST00000560514 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
TSPAN3-208ENST00000560514 STK38Q15208 465 aa18.61■□□□□ 0.57
TSPAN3-208ENST00000560514 ZACNQ401N2 412 aa18.61■□□□□ 0.57
TSPAN3-208ENST00000560514 TWNKQ96RR1 684 aa18.61■□□□□ 0.57
TSPAN3-208ENST00000560514 ABCB8Q9NUT2 735 aa18.61■□□□□ 0.57
TSPAN3-208ENST00000560514 ZNF462Q96JM2 2506 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 BRINP1O60477 761 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 ASS1P00966 412 aaKnown RBP18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 IGHV4-34P06331 123 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 POLR2EP19388 210 aaKnown RBP18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 SYT1P21579 422 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 HOXD9P28356 352 aaPredicted RBP18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 YWHAGP61981 247 aaKnown RBP eCLIP18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 INCA1Q0VD86 236 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 ILKQ13418 452 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 SLC45A4Q5BKX6 768 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 CNNM4Q6P4Q7 775 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 FBXL19Q6PCT2 694 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 USP30Q70CQ3 517 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 FAM217AQ8IXS0 508 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 SAP25Q8TEE9 199 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 TMA16Q96EY4 203 aaKnown RBP18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 USP28Q96RU2 1077 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 LGMNQ99538 433 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 C7orf25Q9BPX7 421 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 CYP3A43Q9HB55 503 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 FBXL12Q9NXK8 326 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 GGA2Q9UJY4 613 aa18.6■□□□□ 0.57
TSPAN3-208ENST00000560514 LRRC72A6NJI9 287 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 ERVH48-1M5A8F1 160 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 DLDP09622 509 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 C7P10643 843 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 PABPC1P11940 636 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 CD58P19256 250 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 GLDCP23378 1020 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 CD38P28907 300 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 SLC8A3P57103 927 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 ST8SIA6P61647 398 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 DLG4P78352 724 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 E2F4Q16254 413 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 BROXQ5VW32 411 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 MBLAC2Q68D91 279 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 SV2AQ7L0J3 742 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 CCDC150Q8NCX0 1101 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 ORAI3Q9BRQ5 295 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 PABPC3Q9H361 631 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 ZSCAN16Q9H4T2 348 aaPredicted RBP18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 CLCA2Q9UQC9 943 aa18.59■□□□□ 0.57
TSPAN3-208ENST00000560514 HLA-DRAP01903 254 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 TLE3Q04726 772 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 PPP1R26Q5T8A7 1209 aaPredicted RBP18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 NCEH1Q6PIU2 408 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 ADIPOR2Q86V24 386 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 SPACA3Q8IXA5 215 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 OXR1Q8N573 874 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 HEXIM2Q96MH2 286 aaKnown RBP18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 OMDQ99983 421 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 BACH2Q9BYV9 841 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 BLZF1Q9H2G9 400 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 MAGEF1Q9HAY2 307 aa18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 OLA1Q9NTK5 396 aaKnown RBP18.58■□□□□ 0.56
TSPAN3-208ENST00000560514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 IKBKBO14920 756 aa18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 EPHA8P29322 1005 aaPredicted RBP18.57■□□□□ 0.56
TSPAN3-208ENST00000560514 GALCP54803 685 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms