RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 GGCXP38435 758 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 HADHBP55084 474 aaKnown RBP22.02■■□□□ 1.12
CASC4-204ENST00000557945 NR1H3Q13133 447 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 DHCR24Q15392 516 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 ANO4Q32M45 955 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 ITPRIPL2Q3MIP1 535 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 MS4A13Q5J8X5 152 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 LY6G5CQ5SRR4 150 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 PIK3R6Q5UE93 754 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 TMEM25Q86YD3 366 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 CPNE8Q86YQ8 564 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 FAM217AQ8IXS0 508 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 CPXM2Q8N436 756 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 HAPLN3Q96S86 360 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 USP18Q9UMW8 372 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 PPP2R2CQ9Y2T4 447 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 HS3ST4Q9Y661 456 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 BUB1BO60566 1050 aaPredicted RBP22.01■■□□□ 1.11
CASC4-204ENST00000557945 CYBBP04839 570 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 CYP17A1P05093 508 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 SLC6A4P31645 630 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 MAN1A1P33908 653 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 EFHC2Q5JST6 749 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 RHBDF2Q6PJF5 856 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 LGI2Q8N0V4 545 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 TPCN2Q8NHX9 752 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 DNASE1L2Q92874 299 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 BHMTQ93088 406 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 NTAN1Q96AB6 310 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 PEBP4Q96S96 227 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 ZWILCHQ9H900 591 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 LZTFL1Q9NQ48 299 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 GUCA1BQ9UMX6 200 aa22.01■■□□□ 1.11
CASC4-204ENST00000557945 OTOL1A6NHN0 477 aaPredicted RBP22■■□□□ 1.11
CASC4-204ENST00000557945 F5H5T6 163 aa22■■□□□ 1.11
CASC4-204ENST00000557945 KRT86O43790 486 aa22■■□□□ 1.11
CASC4-204ENST00000557945 ADH5P11766 374 aa22■■□□□ 1.11
CASC4-204ENST00000557945 TCF4P15884 667 aa22■■□□□ 1.11
CASC4-204ENST00000557945 AUHQ13825 339 aaKnown RBP22■■□□□ 1.11
CASC4-204ENST00000557945 IFI16Q16666 785 aaKnown RBP22■■□□□ 1.11
CASC4-204ENST00000557945 HADHQ16836 314 aaKnown RBP22■■□□□ 1.11
CASC4-204ENST00000557945 UBALD2Q8IYN6 164 aa22■■□□□ 1.11
CASC4-204ENST00000557945 DDI1Q8WTU0 396 aa22■■□□□ 1.11
CASC4-204ENST00000557945 CALR3Q96L12 384 aaKnown RBP22■■□□□ 1.11
CASC4-204ENST00000557945 BBS2Q9BXC9 721 aa22■■□□□ 1.11
CASC4-204ENST00000557945 TRPV5Q9NQA5 729 aa22■■□□□ 1.11
CASC4-204ENST00000557945 GPATCH2LQ9NWQ4 482 aa22■■□□□ 1.11
CASC4-204ENST00000557945 FBXL21Q9UKT6 434 aa22■■□□□ 1.11
CASC4-204ENST00000557945 FZD10Q9ULW2 581 aa22■■□□□ 1.11
CASC4-204ENST00000557945 HYOU1Q9Y4L1 999 aa22■■□□□ 1.11
CASC4-204ENST00000557945 KIF26AQ9ULI4 1882 aaPredicted RBP22■■□□□ 1.11
CASC4-204ENST00000557945 NEDD8-MDP1E9PL57 170 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 GJC1P36383 396 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 AIF1P55008 147 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 MLLT6P55198 1093 aaPredicted RBP21.99■■□□□ 1.11
CASC4-204ENST00000557945 GAD2Q05329 585 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 TMA16Q96EY4 203 aaKnown RBP21.99■■□□□ 1.11
CASC4-204ENST00000557945 PRMT1Q99873 361 aaKnown RBP21.99■■□□□ 1.11
CASC4-204ENST00000557945 HEBP1Q9NRV9 189 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 PLK2Q9NYY3 685 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 VANGL2Q9ULK5 521 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 SPOPO43791 374 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 MOCS3O95396 460 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 COMTP21964 271 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 IL1R2P27930 398 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 SLC1A1P43005 524 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 SOX9P48436 509 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 SCAPQ12770 1279 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 SMTNL2Q2TAL5 461 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 MPPE1Q53F39 396 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 ERMARDQ5T6L9 678 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 ACBD5Q5T8D3 534 aaPredicted RBP21.99■■□□□ 1.11
CASC4-204ENST00000557945 C11orf63Q6NUN7 778 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 LRRC31Q6UY01 552 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 C14orf80Q86SX3 495 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 DAAM2Q86T65 1068 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 CFAP52Q8N1V2 620 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 MYEOVQ96EZ4 313 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 C1orf74Q96LT6 269 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 RPRD1AQ96P16 312 aaPredicted RBP21.99■■□□□ 1.11
CASC4-204ENST00000557945 SNRNP25Q9BV90 132 aaKnown RBP21.99■■□□□ 1.11
CASC4-204ENST00000557945 MAGEB5Q9BZ81 275 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 OSBPL2Q9H1P3 480 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 GOLPH3Q9H4A6 298 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 DHX35Q9H5Z1 703 aaKnown RBP21.99■■□□□ 1.11
CASC4-204ENST00000557945 CA14Q9ULX7 337 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 AP4E1Q9UPM8 1137 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 ALG6Q9Y672 507 aa21.99■■□□□ 1.11
CASC4-204ENST00000557945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.99■■□□□ 1.11
CASC4-204ENST00000557945 TYW5A2RUC4 315 aaKnown RBP21.98■■□□□ 1.11
CASC4-204ENST00000557945 ZSCAN12O43309 604 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 TBL1XO60907 577 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 SRGAP2O75044 1071 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 SLC34A2O95436 690 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 TNNT1P13805 278 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 SGSHP51688 502 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 TAS2R40P59535 323 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 SLC25A11Q02978 314 aaKnown RBP21.98■■□□□ 1.11
CASC4-204ENST00000557945 SLC44A4Q53GD3 710 aa21.98■■□□□ 1.11
CASC4-204ENST00000557945 BOLA3Q53S33 107 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms