RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 XPO7Q9UIA9 1087 aaKnown RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 TLR6Q9Y2C9 796 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 PCDHGA5Q9Y5G8 931 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 STON1Q9Y6Q2 735 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 THADAQ6YHU6 1953 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 WASH3PC4AMC7 463 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 F8VZ95 297 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 GDF9O60383 454 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 CYP11B1P15538 503 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 ZNF18P17022 549 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 CDH5P33151 784 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-224ENST00000556737 MYL5Q02045 173 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 PTK2Q05397 1052 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 RAPGEF1Q13905 1077 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 ZNF234Q14588 700 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 NCAPHQ15003 741 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 EIF4HQ15056 248 aaKnown RBP10.73□□□□□ -0.69
SHMT2-224ENST00000556737 ELF2Q15723 593 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 FUT11Q495W5 492 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 PIK3R6Q5UE93 754 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 TCEAL6Q6IPX3 200 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 APTXQ7Z2E3 356 aaKnown RBP10.73□□□□□ -0.69
SHMT2-224ENST00000556737 LUZP1Q86V48 1076 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 C11orf74Q86VG3 221 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 EPS8L1Q8TE68 723 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 SORCS1Q8WY21 1168 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 TCEAL3Q969E4 200 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 ERLEC1Q96DZ1 483 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 PPP1R13BQ96KQ4 1090 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 LMLNQ96KR4 655 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 TRIM62Q9BVG3 475 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 ADAM33Q9BZ11 813 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 IRX2Q9BZI1 471 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-224ENST00000556737 NUCKS1Q9H1E3 243 aaKnown RBP10.73□□□□□ -0.69
SHMT2-224ENST00000556737 SLC6A17Q9H1V8 727 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 FANCLQ9NW38 375 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 ASNSD1Q9NWL6 643 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 ELOVL2Q9NXB9 296 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 BCCIPQ9P287 314 aaKnown RBP eCLIP10.73□□□□□ -0.69
SHMT2-224ENST00000556737 SIK3Q9Y2K2 1263 aa10.73□□□□□ -0.69
SHMT2-224ENST00000556737 CEP192Q8TEP8 1941 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 ABCA7Q8IZY2 2146 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 IGHV1OR15-9A0A0B4J2B8 117 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 BCLAF3A2AJT9 711 aaKnown RBP10.72□□□□□ -0.69
SHMT2-224ENST00000556737 PRR5-ARHGAP8B1AHC4 643 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 PES1O00541 588 aaKnown RBP10.72□□□□□ -0.69
SHMT2-224ENST00000556737 HSF2BPO75031 334 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 DAB1O75553 588 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 RHOBTB1O94844 696 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 TRUB2O95900 331 aaKnown RBP10.72□□□□□ -0.69
SHMT2-224ENST00000556737 GLI1P08151 1106 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 ZNF806P0C7X5 589 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 PRKCHP24723 683 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 GBP1P32455 592 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 CD70P32970 193 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 SLC11A2P49281 568 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 YWHAZP63104 245 aaKnown RBP10.72□□□□□ -0.69
SHMT2-224ENST00000556737 ARHGAP8P85298 464 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 PUM1Q14671 1186 aaKnown RBP eCLIP10.72□□□□□ -0.69
SHMT2-224ENST00000556737 MPP7Q5T2T1 576 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 SLC26A9Q7LBE3 791 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 NOP9Q86U38 636 aaKnown RBP10.72□□□□□ -0.69
SHMT2-224ENST00000556737 ADIPOR2Q86V24 386 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 UNC45BQ8IWX7 931 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 WFIKKN2Q8TEU8 576 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 TMA16Q96EY4 203 aaKnown RBP10.72□□□□□ -0.69
SHMT2-224ENST00000556737 SPACA7Q96KW9 195 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 MRGPRX1Q96LB2 322 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 VPS16Q9H269 839 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 RXFP3Q9NSD7 469 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 ABCB8Q9NUT2 735 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 GGA2Q9UJY4 613 aa10.72□□□□□ -0.69
SHMT2-224ENST00000556737 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 LGALS16A8MUM7 142 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 CAPN9O14815 690 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 NPC1O15118 1278 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 TBL1XO60907 577 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 GRAP2O75791 330 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 MOCS2O96007 188 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 PABPC1P11940 636 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 KRT9P35527 623 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 PTGER3P43115 390 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 COPB1P53618 953 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 COPAP53621 1224 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 ATXN1P54253 815 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 JAM2P57087 298 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 RPS24P62847 133 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 PTPRNQ16849 979 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 DCAF6Q58WW2 860 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 ZC3H12AQ5D1E8 599 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 MS4A13Q5J8X5 152 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 PEAR1Q5VY43 1037 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 ERMP1Q7Z2K6 904 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 DEFB106AQ8N104 65 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 AHI1Q8N157 1196 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 HJURPQ8NCD3 748 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 ZNF397Q8NF99 534 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 NETO1Q8TDF5 533 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 SLC20A1Q8WUM9 679 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 PCDH15Q96QU1 1955 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms