RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 OPHN1O60890 802 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 F9P00740 461 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 C1QAP02745 245 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 DRD4P21917 467 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 HOXC13P31276 330 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 FDFT1P37268 417 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 GLUD2P49448 558 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 GPR15P49685 360 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 ZNF135P52742 658 aaPredicted RBP10.99□□□□□ -0.65
CLCN6-208ENST00000494028 LBX1P52954 281 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 WASHC5Q12768 1159 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 IFRD2Q12894 506 aaPredicted RBP10.99□□□□□ -0.65
CLCN6-208ENST00000494028 MANEALQ5VSG8 457 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 ZNF280DQ6N043 979 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 MSANTD2Q6P1R3 559 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 ARHGEF18Q6ZSZ5 1173 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 DENND5BQ6ZUT9 1274 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 CAND1Q86VP6 1230 aaKnown RBP10.99□□□□□ -0.65
CLCN6-208ENST00000494028 NPAS4Q8IUM7 802 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 TP53INP2Q8IXH6 220 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 SRRM1Q8IYB3 904 aaKnown RBP10.99□□□□□ -0.65
CLCN6-208ENST00000494028 DCP1BQ8IZD4 617 aaKnown RBP10.99□□□□□ -0.65
CLCN6-208ENST00000494028 TTC9BQ8N6N2 239 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 STKLD1Q8NE28 680 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 FBF1Q8TES7 1133 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 APBB2Q92870 758 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 PAFAH2Q99487 392 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 LGMNQ99538 433 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 EPAS1Q99814 870 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 COLEC11Q9BWP8 271 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 TKTL2Q9H0I9 626 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 PRDM12Q9H4Q4 367 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 NMUR1Q9HB89 426 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 INTS9Q9NV88 658 aaKnown RBP10.99□□□□□ -0.65
CLCN6-208ENST00000494028 ARHGEF38Q9NXL2 777 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLCN6-208ENST00000494028 TBK1Q9UHD2 729 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 ADAM28Q9UKQ2 775 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 RAD54BQ9Y620 910 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 ATXN2Q99700 1313 aaKnown RBP10.99□□□□□ -0.65
CLCN6-208ENST00000494028 OBSL1O75147 1896 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 MYO18AQ92614 2054 aaKnown RBP10.99□□□□□ -0.65
CLCN6-208ENST00000494028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 GMNCA6NCL1 334 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 ENPP3O14638 875 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 TRIM66O15016 1216 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 MSI1O43347 362 aaKnown RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 PQBP1O60828 265 aaKnown RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 SPAG6O75602 509 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 ZNF189O75820 626 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 LRIG2O94898 1065 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 CXCL10P02778 98 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 APRTP07741 180 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 BRAFP15056 766 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 FGFR3P22607 806 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 CYP2C18P33260 490 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 MAGEA11P43364 429 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 HCAR3P49019 387 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 PGFP49763 221 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 GALNT2Q10471 571 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 NR1H3Q13133 447 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 MRPL58Q14197 206 aaKnown RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 PDK1Q15118 436 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 MTFR1Q15390 333 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 PKN2Q16513 984 aaKnown RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 NFE2Q16621 373 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 QPCTQ16769 361 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 ARL13BQ3SXY8 428 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 BRMS1LQ5PSV4 323 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 ANKRD20A2Q5SQ80 823 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 ARTNQ5T4W7 220 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 ANKRD20A1Q5TYW2 823 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 ANKRD20A3Q5VUR7 823 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 FUT10Q6P4F1 479 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 BZW1Q7L1Q6 419 aaKnown RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 SCN4BQ8IWT1 228 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 ABI1Q8IZP0 508 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 CRIPAKQ8N1N5 446 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 BCL7CQ8WUZ0 217 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 DCAKDQ8WVC6 231 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 CASP10Q92851 521 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 HDAC11Q96DB2 347 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 P2RY11Q96G91 374 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 C8orf48Q96LL4 319 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 ZNF317Q96PQ6 595 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 FAM193BQ96PV7 902 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-208ENST00000494028 CCT8L2Q96SF2 557 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 GORASP1Q9BQQ3 440 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 BEGAINQ9BUH8 593 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 OGDHLQ9ULD0 1010 aa10.98□□□□□ -0.65
CLCN6-208ENST00000494028 A0A1W2PQH9 124 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 TCRBV9S1A1TA0A576 114 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 MTMR11A4FU01 709 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 OR6C75A6NL08 312 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 RASA4BC9J798 803 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 F5H423 210 aaPredicted RBP10.97□□□□□ -0.65
CLCN6-208ENST00000494028 HOXA2O43364 376 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 RASA4O43374 803 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 AVILO75366 819 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms