RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 EBNA1BP2Q99848 306 aaKnown RBP11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 ACTR5Q9H9F9 607 aaPredicted RBP11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 COX16Q9P0S2 106 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 IGSF9Q9P2J2 1179 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 TTLL3Q9Y4R7 772 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 FOXO6A8MYZ6 492 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 RNF103O00237 685 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 WDR4P57081 412 aaKnown RBP11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 YWHAHQ04917 246 aaPredicted RBP11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 PAN2Q504Q3 1202 aaKnown RBP11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 NOMO2Q5JPE7 1267 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 BSPRYQ5W0U4 402 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 SLC26A11Q86WA9 606 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 SPATA2LQ8IUW3 424 aaPredicted RBP11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 AGGF1Q8N302 714 aaeCLIP11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 CD99L2Q8TCZ2 262 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 PPM1EQ8WY54 764 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 SIGLEC10Q96LC7 697 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 KDM4CQ9H3R0 1056 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 WDCPQ9H6R7 721 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 MFHAS1Q9Y4C4 1052 aa11.13□□□□□ -0.63
PHACTR4-204ENST00000493669 IGLV3-25P01717 112 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 APOEP02649 317 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 ERCC2P18074 760 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 CA4P22748 312 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 PRMT2P55345 433 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 KBTBD12Q3ZCT8 623 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 LACTB2Q53H82 288 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 BRMS1LQ5PSV4 323 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 LGSNQ5TDP6 509 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 COLGALT1Q8NBJ5 622 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 SLAIN1Q8ND83 568 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 GSDMBQ8TAX9 411 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 GDAP1Q8TB36 358 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 LGMNQ99538 433 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 NAT9Q9BTE0 207 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 OSBPL2Q9H1P3 480 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 PRDM12Q9H4Q4 367 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 TMLHEQ9NVH6 421 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 A0A1W2PQ45 241 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 A0A1W2PQY0 241 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 AVILO75366 819 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 FSBPO95073 299 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 OAZ2O95190 189 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 C1QAP02745 245 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 KRT4P19013 534 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 ZNF33AQ06730 810 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 AP1B1Q10567 949 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 ARHGEF6Q15052 776 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 PDK4Q16654 411 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 NUGGCQ68CJ6 796 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 LRRC8BQ6P9F7 803 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 RTN4RL1Q86UN2 441 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 LRRTM3Q86VH5 581 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 LRRC6Q86X45 466 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 DCP1BQ8IZD4 617 aaKnown RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 FUBP3Q96I24 572 aaKnown RBP eCLIP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 ELAC2Q9BQ52 826 aaKnown RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 ELAC1Q9H777 363 aaKnown RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 STARD7Q9NQZ5 370 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 USP15Q9Y4E8 981 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 SPAG7O75391 227 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 SUN1O94901 812 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 MT-ND3P03897 115 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 PPIDQ08752 370 aaKnown RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 EIF4EBP2Q13542 120 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 MBTPS1Q14703 1052 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 RNF187Q5TA31 235 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 STEAP4Q687X5 459 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 LHX8Q68G74 356 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 DENND5BQ6ZUT9 1274 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 TAC4Q86UU9 113 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 COLGALT2Q8IYK4 626 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 C4orf33Q8N1A6 199 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 ADAM32Q8TC27 787 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 DQX1Q8TE96 717 aaKnown RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 HASPINQ8TF76 798 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 HDAC11Q96DB2 347 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 CFAP36Q96G28 342 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 VAT1Q99536 393 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 RHOBTB2Q9BYZ6 727 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 TRPV6Q9H1D0 765 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 HMX1Q9NP08 348 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 TMPRSS4Q9NRS4 437 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 FGFR1OP2Q9NVK5 253 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 TMEM161AQ9NX61 479 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 PCDHA11Q9Y5I1 949 aa11.12□□□□□ -0.63
PHACTR4-204ENST00000493669 A0A1W2PPM1 405 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 ARVCFO00192 962 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 SYN3O14994 580 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 KRT37O76014 449 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 TAC1P20366 129 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 YY1P25490 414 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 WASHC5Q12768 1159 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 MTFR1Q15390 333 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 NFE2Q16621 373 aaPredicted RBP11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 CLLU1OSQ5K130 101 aa11.11□□□□□ -0.63
PHACTR4-204ENST00000493669 TTC39BQ5VTQ0 682 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms