RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.52■□□□□ 0.56
ABCF3-217ENST00000489719 DLL3Q9NYJ7 618 aa18.52■□□□□ 0.56
ABCF3-217ENST00000489719 TJP2Q9UDY2 1190 aa18.52■□□□□ 0.56
ABCF3-217ENST00000489719 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-217ENST00000489719 HSF2BPO75031 334 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 ZNF217O75362 1048 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 CAVIN2O95810 425 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 SLC2A3P11169 496 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 BCKDHBP21953 392 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 SLC6A4P31645 630 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 MPLP40238 635 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 DHPSP49366 369 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-217ENST00000489719 SLC6A3Q01959 620 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 MAP7D1Q3KQU3 841 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 AASDHQ4L235 1098 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-217ENST00000489719 FAM133BQ5BKY9 247 aaKnown RBP18.51■□□□□ 0.55
ABCF3-217ENST00000489719 TAF3Q5VWG9 929 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 SLC36A4Q6YBV0 504 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 CHST9Q7L1S5 443 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 ERMP1Q7Z2K6 904 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 DGLUCYQ7Z3D6 616 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 ATP6V0D2Q8N8Y2 350 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 HJURPQ8NCD3 748 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-217ENST00000489719 NAT10Q9H0A0 1025 aaKnown RBP18.51■□□□□ 0.55
ABCF3-217ENST00000489719 FAM204AQ9H8W3 233 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 ABCB8Q9NUT2 735 aa18.51■□□□□ 0.55
ABCF3-217ENST00000489719 SYNJ2BP-COX16A0A087WUM0 186 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 BCLAF3A2AJT9 711 aaKnown RBP18.5■□□□□ 0.55
ABCF3-217ENST00000489719 GRAP2O75791 330 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 ATP5BP06576 529 aaKnown RBP18.5■□□□□ 0.55
ABCF3-217ENST00000489719 PABPC1P11940 636 aaKnown RBP18.5■□□□□ 0.55
ABCF3-217ENST00000489719 HLA-FP30511 346 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 IL12RB1P42701 662 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 SGSHP51688 502 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 COPB1P53618 953 aaKnown RBP18.5■□□□□ 0.55
ABCF3-217ENST00000489719 ZNF234Q14588 700 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 SF3A2Q15428 464 aaKnown RBP18.5■□□□□ 0.55
ABCF3-217ENST00000489719 SPDYCQ5MJ68 293 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 PLA2G2CQ5R387 149 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 NADSYN1Q6IA69 706 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 FAM183BPQ6ZVS7 135 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 ERICH1Q86X53 443 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 ZDHHC17Q8IUH5 632 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 TMEFF1Q8IYR6 380 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 FRMD1Q8N878 549 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 NETO1Q8TDF5 533 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 SORCS1Q8WY21 1168 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 BTN2A3PQ96KV6 586 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 SLC2A13Q96QE2 648 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 FAM207AQ9NSI2 230 aaPredicted RBP18.5■□□□□ 0.55
ABCF3-217ENST00000489719 DDIT4Q9NX09 232 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 COX16Q9P0S2 106 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 CALCOCO1Q9P1Z2 691 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 GGA2Q9UJY4 613 aa18.5■□□□□ 0.55
ABCF3-217ENST00000489719 ERBB2P04626 1255 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 POLR2EP19388 210 aaKnown RBP18.49■□□□□ 0.55
ABCF3-217ENST00000489719 NDUFV2P19404 249 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 ABCB4P21439 1286 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 CCR1P32246 355 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 ATXN1P54253 815 aaKnown RBP18.49■□□□□ 0.55
ABCF3-217ENST00000489719 RNASE9P60153 205 aaKnown RBP18.49■□□□□ 0.55
ABCF3-217ENST00000489719 POLR2FP61218 127 aaKnown RBP18.49■□□□□ 0.55
ABCF3-217ENST00000489719 FOXK2Q01167 660 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 PTPN20Q4JDL3 420 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 MS4A13Q5J8X5 152 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 TMEM215Q68D42 235 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 KIAA1324Q6UXG2 1013 aaKnown RBP18.49■□□□□ 0.55
ABCF3-217ENST00000489719 SERPINA13PQ6UXR4 307 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 CYP2U1Q7Z449 544 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 MFN1Q8IWA4 741 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 LGI2Q8N0V4 545 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 AHI1Q8N157 1196 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 CARNMT1Q8N4J0 409 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 MSANTD4Q8NCY6 345 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 FIBINQ8TAL6 211 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 C18orf8Q96DM3 657 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 RTKNQ9BST9 563 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 NUCKS1Q9H1E3 243 aaKnown RBP18.49■□□□□ 0.55
ABCF3-217ENST00000489719 LIMA1Q9UHB6 759 aaKnown RBP18.49■□□□□ 0.55
ABCF3-217ENST00000489719 MBD1Q9UIS9 605 aaPredicted RBP18.49■□□□□ 0.55
ABCF3-217ENST00000489719 DAAM1Q9Y4D1 1078 aa18.49■□□□□ 0.55
ABCF3-217ENST00000489719 LRRC10BA6NIK2 292 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 KCNU1A8MYU2 1149 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 F8VZ95 297 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 AP5Z1O43299 807 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 GFPT2O94808 682 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 IGLV3-25P01717 112 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 EPHX1P07099 455 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 NOS2P35228 1153 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 RPS24P62847 133 aaKnown RBP18.48■□□□□ 0.55
ABCF3-217ENST00000489719 RPL6Q02878 288 aaKnown RBP18.48■□□□□ 0.55
ABCF3-217ENST00000489719 UBXN1Q04323 297 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 TYRO3Q06418 890 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 MTA1Q13330 715 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 ENPP2Q13822 863 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 FUT11Q495W5 492 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 FNDC3BQ53EP0 1204 aaKnown RBP18.48■□□□□ 0.55
ABCF3-217ENST00000489719 MBLAC2Q68D91 279 aa18.48■□□□□ 0.55
ABCF3-217ENST00000489719 OLFML1Q6UWY5 402 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms