RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PRICKLE1Q96MT3 831 aaPredicted RBP25.96■■□□□ 1.75
HMGN1-217ENST00000489072 CIPCQ9C0C6 399 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 SLC6A17Q9H1V8 727 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 GANQ9H2C0 597 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 XPO7Q9UIA9 1087 aaKnown RBP25.96■■□□□ 1.75
HMGN1-217ENST00000489072 MUC22E2RYF6 1773 aaPredicted RBP25.96■■□□□ 1.75
HMGN1-217ENST00000489072 BCLAF3A2AJT9 711 aaKnown RBP25.95■■□□□ 1.74
HMGN1-217ENST00000489072 TBL1XO60907 577 aa25.95■■□□□ 1.74
HMGN1-217ENST00000489072 MOCS2O96007 188 aaPredicted RBP25.95■■□□□ 1.74
HMGN1-217ENST00000489072 CYP11B1P15538 503 aa25.95■■□□□ 1.74
HMGN1-217ENST00000489072 BPIFB4P59827 614 aa25.95■■□□□ 1.74
HMGN1-217ENST00000489072 EIF4EBP2Q13542 120 aaPredicted RBP25.95■■□□□ 1.74
HMGN1-217ENST00000489072 ZNF234Q14588 700 aa25.95■■□□□ 1.74
HMGN1-217ENST00000489072 EIF4HQ15056 248 aaKnown RBP25.95■■□□□ 1.74
HMGN1-217ENST00000489072 MPP7Q5T2T1 576 aa25.95■■□□□ 1.74
HMGN1-217ENST00000489072 OLFML1Q6UWY5 402 aa25.95■■□□□ 1.74
HMGN1-217ENST00000489072 SLC2A13Q96QE2 648 aa25.95■■□□□ 1.74
HMGN1-217ENST00000489072 IRX2Q9BZI1 471 aaPredicted RBP25.95■■□□□ 1.74
HMGN1-217ENST00000489072 NUCKS1Q9H1E3 243 aaKnown RBP25.95■■□□□ 1.74
HMGN1-217ENST00000489072 ABCB8Q9NUT2 735 aa25.95■■□□□ 1.74
HMGN1-217ENST00000489072 ASNSD1Q9NWL6 643 aa25.95■■□□□ 1.74
HMGN1-217ENST00000489072 CDV3Q9UKY7 258 aaKnown RBP25.95■■□□□ 1.74
HMGN1-217ENST00000489072 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.94■■□□□ 1.74
HMGN1-217ENST00000489072 NPC1O15118 1278 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 GRAP2O75791 330 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 GLI1P08151 1106 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 ATXN1P54253 815 aaKnown RBP25.94■■□□□ 1.74
HMGN1-217ENST00000489072 DCAF6Q58WW2 860 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 ZC3H12AQ5D1E8 599 aaKnown RBP25.94■■□□□ 1.74
HMGN1-217ENST00000489072 OR6B2Q6IFH4 312 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 KIAA0907Q7Z7F0 614 aaPredicted RBP25.94■■□□□ 1.74
HMGN1-217ENST00000489072 DEFB106AQ8N104 65 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.94■■□□□ 1.74
HMGN1-217ENST00000489072 NOX5Q96PH1 765 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 STK33Q9BYT3 514 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 VPS45Q9NRW7 570 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 RXFP3Q9NSD7 469 aa25.94■■□□□ 1.74
HMGN1-217ENST00000489072 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 F8VZ95 297 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 DHPSP49366 369 aaPredicted RBP25.93■■□□□ 1.74
HMGN1-217ENST00000489072 RPS24P62847 133 aaKnown RBP25.93■■□□□ 1.74
HMGN1-217ENST00000489072 MYL5Q02045 173 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 BYSLQ13895 437 aaKnown RBP25.93■■□□□ 1.74
HMGN1-217ENST00000489072 FUT11Q495W5 492 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 EFHC1Q5JVL4 640 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 TCEAL6Q6IPX3 200 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 CHST9Q7L1S5 443 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 ERMP1Q7Z2K6 904 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 DGLUCYQ7Z3D6 616 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 ADIPOR2Q86V24 386 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 TMEFF1Q8IYR6 380 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 NETO1Q8TDF5 533 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 WFIKKN2Q8TEU8 576 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 DDX1Q92499 740 aaKnown RBP25.93■■□□□ 1.74
HMGN1-217ENST00000489072 TCEAL3Q969E4 200 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 MRGPRX1Q96LB2 322 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 CD93Q9NPY3 652 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 TMEM63CQ9P1W3 806 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 STIM2Q9P246 746 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 GGA2Q9UJY4 613 aa25.93■■□□□ 1.74
HMGN1-217ENST00000489072 CNOT1A5YKK6 2376 aaKnown RBP25.92■■□□□ 1.74
HMGN1-217ENST00000489072 MAP3K13O43283 966 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 TIMM44O43615 452 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 FOXD2O60548 495 aaPredicted RBP25.92■■□□□ 1.74
HMGN1-217ENST00000489072 HSF2BPO75031 334 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 CAVIN2O95810 425 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 PABPC1P11940 636 aaKnown RBP25.92■■□□□ 1.74
HMGN1-217ENST00000489072 SDHBP21912 280 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 PRKCHP24723 683 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 CD70P32970 193 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 CDH5P33151 784 aaPredicted RBP25.92■■□□□ 1.74
HMGN1-217ENST00000489072 PI4KAP42356 2102 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 COPB1P53618 953 aaKnown RBP25.92■■□□□ 1.74
HMGN1-217ENST00000489072 MS4A13Q5J8X5 152 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 TAF3Q5VWG9 929 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 LPCAT2Q7L5N7 544 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 NOP9Q86U38 636 aaKnown RBP25.92■■□□□ 1.74
HMGN1-217ENST00000489072 HJURPQ8NCD3 748 aaPredicted RBP25.92■■□□□ 1.74
HMGN1-217ENST00000489072 LMLNQ96KR4 655 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 DDX50Q9BQ39 737 aaKnown RBP25.92■■□□□ 1.74
HMGN1-217ENST00000489072 CEP83Q9Y592 693 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 NCOR2Q9Y618 2525 aa25.92■■□□□ 1.74
HMGN1-217ENST00000489072 IGHV1OR15-9A0A0B4J2B8 117 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 FAM170AA1A519 330 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 EPHB6O15197 1021 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 APOEP02649 317 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 PTGER3P43115 390 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 CDK17Q00537 523 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 SLC6A3Q01959 620 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 STARD3Q14849 445 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 NCAPHQ15003 741 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 AASDHQ4L235 1098 aaPredicted RBP25.91■■□□□ 1.74
HMGN1-217ENST00000489072 SLC26A9Q7LBE3 791 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 CYP2U1Q7Z449 544 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 C12orf50Q8NA57 414 aaPredicted RBP25.91■■□□□ 1.74
HMGN1-217ENST00000489072 TMEM35BQ8NCS4 154 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 CYB5D2Q8WUJ1 264 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 HSD3B7Q9H2F3 369 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 SYNCQ9H7C4 482 aa25.91■■□□□ 1.74
HMGN1-217ENST00000489072 FAM204AQ9H8W3 233 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms