RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 HERVK_113Q902F9 699 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 CPT1BQ92523 772 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 RUBCNQ92622 972 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 C3orf49Q96BT1 292 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 TRMT61AQ96FX7 289 aaKnown RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 ZNF778Q96MU6 729 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 UROC1Q96N76 676 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 EIF3CQ99613 913 aaKnown RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 CINPQ9BW66 212 aaPredicted RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 CIPCQ9C0C6 399 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 TAF1DQ9H5J8 278 aaPredicted RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 CCDC134Q9H6E4 229 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 ABHD10Q9NUJ1 306 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 LIN7CQ9NUP9 197 aaKnown RBP3.87□□□□□ -1.79
RFC4-211ENST00000460408 RRN3Q9NYV6 651 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 NDUFAF4Q9P032 175 aa3.87□□□□□ -1.79
RFC4-211ENST00000460408 TCRBV5S1A1TA0A578 114 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 H7C1Q1 480 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 HEXIM1O94992 359 aaKnown RBP3.86□□□□□ -1.79
RFC4-211ENST00000460408 CYP3A4P08684 503 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 IGFBP2P18065 325 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 PAX3P23760 479 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 DUSP1P28562 367 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 SOX10P56693 466 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
RFC4-211ENST00000460408 ACTR2P61160 394 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 DCTN1Q14203 1278 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 FAM110CQ1W6H9 321 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 ADCK5Q3MIX3 580 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 TSTD2Q5T7W7 516 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 CEP85Q6P2H3 762 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 NAPRTQ6XQN6 538 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 SLC29A4Q7RTT9 530 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 C2CD5Q86YS7 1000 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 CPOQ8IVL8 374 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 FAM71DQ8N9W8 422 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 SARAFQ96BY9 339 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 REXO5Q96IC2 774 aaKnown RBP3.86□□□□□ -1.79
RFC4-211ENST00000460408 FAR2Q96K12 515 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 ZSCAN31Q96LW9 406 aaPredicted RBP3.86□□□□□ -1.79
RFC4-211ENST00000460408 PYM1Q9BRP8 204 aaKnown RBP3.86□□□□□ -1.79
RFC4-211ENST00000460408 RNF26Q9BY78 433 aaPredicted RBP3.86□□□□□ -1.79
RFC4-211ENST00000460408 USP29Q9HBJ7 922 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 SEPSECSQ9HD40 501 aaKnown RBP3.86□□□□□ -1.79
RFC4-211ENST00000460408 IL17RBQ9NRM6 502 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 RASSF1Q9NS23 344 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 PDP2Q9P2J9 529 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 SLC17A6Q9P2U8 582 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 SERGEFQ9UGK8 458 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.86□□□□□ -1.79
RFC4-211ENST00000460408 KCND3Q9UK17 655 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 GTF2A1LQ9UNN4 478 aa3.86□□□□□ -1.79
RFC4-211ENST00000460408 LRRFIP2Q9Y608 721 aaKnown RBP3.86□□□□□ -1.79
RFC4-211ENST00000460408 MBD3L5A6NJ08 208 aaPredicted RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 E7EVH7 732 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 NPHP1O15259 732 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 MT-CO3P00414 261 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 TFRCP02786 760 aaKnown RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 HNRNPCP07910 306 aaKnown RBP eCLIP3.85□□□□□ -1.79
RFC4-211ENST00000460408 MAPK9P45984 424 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 MCM2P49736 904 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 JAK3P52333 1124 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 COPB1P53618 953 aaKnown RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 RBM6P78332 1123 aaKnown RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 TLE3Q04726 772 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 SRSF4Q08170 494 aaKnown RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 GAB1Q13480 694 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 LARS2Q15031 903 aaKnown RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 RPS6KA2Q15349 733 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 TBRG1Q3YBR2 411 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 ANKRD40Q6AI12 368 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 KYAT3Q6YP21 454 aaKnown RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 TRIM72Q6ZMU5 477 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 RINLQ6ZS11 566 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 RASGRP2Q7LDG7 609 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 LRRTM4Q86VH4 590 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 LAS2Q8IYD9 372 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 IL17REQ8NFR9 667 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 MAFAQ8NHW3 353 aaPredicted RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 AFG1LQ8WV93 481 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 ELOVL1Q9BW60 279 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 ARHGAP39Q9C0H5 1083 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 BRD8Q9H0E9 1235 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 KLK15Q9H2R5 256 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 GGA3Q9NZ52 723 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 C9orf78Q9NZ63 289 aaPredicted RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 ARPP21Q9UBL0 812 aaPredicted RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 RAB21Q9UL25 225 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 TRPC5Q9UL62 973 aaPredicted RBP3.85□□□□□ -1.79
RFC4-211ENST00000460408 RCE1Q9Y256 329 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 SPATA31A1Q5TZJ5 1347 aa3.85□□□□□ -1.79
RFC4-211ENST00000460408 CYP3A7-CYP3A51PA0A087WV96 503 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 TARM1B6A8C7 271 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 TISP43B9A030 160 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 PRYO14603 147 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 IKBKBO14920 756 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 FYB1O15117 783 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 EXOC3O60645 756 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 JTBO76095 146 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 KAT7O95251 611 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms