RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 A0A1W2PNU3 283 aaPredicted RBP13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 MAGEC1O60732 1142 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 TACC1O75410 805 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 LDHAP00338 332 aaKnown RBP13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 KRT18P05783 430 aaKnown RBP13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 GP1BAP07359 652 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 CKMT1AP12532 417 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 CCR5P51681 352 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 DHX8Q14562 1220 aaKnown RBP13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 FOXR1Q6PIV2 292 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 ZSWIM2Q8NEG5 633 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 OR2T34Q8NGX1 318 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 CYB5D2Q8WUJ1 264 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 ATXN7L3BQ96GX2 97 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 PRR11Q96HE9 360 aaPredicted RBP13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 ANKRD36BP1Q96IX9 119 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 FIZ1Q96SL8 496 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 NEUROG2Q9H2A3 272 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 PABPC3Q9H361 631 aaKnown RBP13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 DPEP3Q9H4B8 488 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 FBXO44Q9H4M3 255 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 CYLDQ9NQC7 956 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 GEMIN8Q9NWZ8 242 aaKnown RBP13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 TJP2Q9UDY2 1190 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 PLEKHB1Q9UF11 243 aaPredicted RBP13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 SUN2Q9UH99 717 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 ATP8B3O60423 1300 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 JAK2O60674 1132 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 STC2O76061 302 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 TNFSF15O95150 251 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 KLKB1P03952 638 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 PRPHP41219 470 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 MLLT3P42568 568 aaPredicted RBP13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 GNL2Q13823 731 aaKnown RBP13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 NCAPHQ15003 741 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 TBR1Q16650 682 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 SKIDA1Q1XH10 827 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 CLEC14AQ86T13 490 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 PTRH1Q86Y79 214 aaKnown RBP13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 B3GALNT2Q8NCR0 500 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 OR4C6Q8NH72 309 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 MAPK15Q8TD08 544 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 DDI1Q8WTU0 396 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 GTF3C6Q969F1 213 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 SAAL1Q96ER3 474 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 MED10Q9BTT4 135 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 EPN3Q9H201 632 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 ST6GALNAC4Q9H4F1 302 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 INTS13Q9NVM9 706 aa13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 TPX2Q9ULW0 747 aaKnown RBP13.19□□□□□ -0.3
AC004540.1-204ENST00000449537 NBPF19A0A087WUL8 3843 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 A8MXQ7 604 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 MDM4O15151 490 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 LZTS3O60299 673 aaPredicted RBP13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 TBCAO75347 108 aaKnown RBP13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 TNNC2P02585 160 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 THEGLP0DJG4 465 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 NEK4P51957 841 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 PDE4CQ08493 712 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 KLHDC10Q6PID8 442 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 ZNF564Q8TBZ8 553 aaPredicted RBP13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 RSPH9Q9H1X1 276 aaPredicted RBP13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 EVA1BQ9NVM1 165 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 NUDT5Q9UKK9 219 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 RELNP78509 3460 aa13.18□□□□□ -0.3
AC004540.1-204ENST00000449537 ITPR2Q14571 2701 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 GOLGA8IPA6NC78 632 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 GOLGA8JA6NMD2 632 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 FFAR2O15552 330 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 RNASEH1O60930 286 aaKnown RBP13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 PRPF6O94906 941 aaKnown RBP13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 RARGP13631 454 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 DGKAP23743 735 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 OVGP1Q12889 678 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 ME3Q16798 604 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 C10orf120Q5SQS8 335 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 NAPEPLDQ6IQ20 393 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 IQCHQ86VS3 1027 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 OR5B17Q8NGF7 314 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 WDR36Q8NI36 951 aaKnown RBP13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 SMARCD1Q96GM5 515 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 APOLD1Q96LR9 279 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 OMDQ99983 421 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 OSER1Q9NX31 292 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 SERGEFQ9UGK8 458 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 ENTPD2Q9Y5L3 495 aa13.17□□□□□ -0.3
AC004540.1-204ENST00000449537 A0A1W2PP55 124 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 RNASEH2AO75792 299 aaKnown RBP13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 AP1G2O75843 785 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 ATP5BP06576 529 aaKnown RBP13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 ALPPL2P10696 532 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms