RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 HCAR3P49019 387 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 RING1Q06587 406 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 DHX34Q14147 1143 aaKnown RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 NAA30Q147X3 362 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 ELF2Q15723 593 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 SLC9A4Q6AI14 798 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 MAATS1Q7Z4T9 603 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 PYROXD2Q8N2H3 581 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 FCRL2Q96LA5 508 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 CSPG4P5Q96PW8 444 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 LRRC1Q9BTT6 524 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 NSUN3Q9H649 340 aaKnown RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 ZNF334Q9HCZ1 680 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 MAN1C1Q9NR34 630 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 TMPRSS4Q9NRS4 437 aa18.87■□□□□ 0.61
HMGN1-206ENST00000431390 CWC15Q9P013 229 aaKnown RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 R3HDM2Q9Y2K5 976 aaKnown RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 HBS1LQ9Y450 684 aaKnown RBP18.87■□□□□ 0.61
HMGN1-206ENST00000431390 APOC4-APOC2K7ER74 178 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 DCXO43602 365 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 TBX18O95935 607 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 APOC2P02655 101 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 RHOXF2BP0C7M4 288 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 ZFXP17010 805 aaPredicted RBP18.86■□□□□ 0.61
HMGN1-206ENST00000431390 COILP38432 576 aaPredicted RBP18.86■□□□□ 0.61
HMGN1-206ENST00000431390 DRICH1Q6PGQ1 229 aaPredicted RBP18.86■□□□□ 0.61
HMGN1-206ENST00000431390 ELMSAN1Q6PJG2 1045 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 CCDC137Q6PK04 289 aaKnown RBP18.86■□□□□ 0.61
HMGN1-206ENST00000431390 TMEM150AQ86TG1 271 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 TMC8Q8IU68 726 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 PCDH19Q8TAB3 1148 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 C1orf54Q8WWF1 131 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 RUBCNQ92622 972 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 RHOXF2Q9BQY4 288 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 LRRC3Q9BY71 257 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 MAGEB5Q9BZ81 275 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 ANKZF1Q9H8Y5 726 aa18.86■□□□□ 0.61
HMGN1-206ENST00000431390 APOL1O14791 398 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 OAS1P00973 400 aaKnown RBP18.85■□□□□ 0.61
HMGN1-206ENST00000431390 APOEP02649 317 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 HNRNPA1P09651 372 aaKnown RBP eCLIP18.85■□□□□ 0.61
HMGN1-206ENST00000431390 GOT1P17174 413 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 TGM2P21980 687 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 HTR7P34969 479 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 ZP2Q05996 745 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 ACBD5Q5T8D3 534 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-206ENST00000431390 MIB1Q86YT6 1006 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 PQLC3Q8N755 202 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 EPAS1Q99814 870 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 CLDND1Q9NY35 253 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 OR12D3Q9UGF7 316 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 AMACRQ9UHK6 382 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 SLC12A8A0AV02 714 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 EEF2KO00418 725 aaKnown RBP18.85■□□□□ 0.61
HMGN1-206ENST00000431390 COCHO43405 550 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 RAD51CO43502 376 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 PAGE1O75459 146 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 TUBBP07437 444 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 POU2F2P09086 479 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 EPCAMP16422 314 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 CDC25CP30307 473 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 DYNLT1P63172 113 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 NRG1Q02297 640 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-206ENST00000431390 COL19A1Q14993 1142 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 NUGGCQ68CJ6 796 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 TTC27Q6P3X3 843 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 ATP6V0D2Q8N8Y2 350 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 ATG4AQ8WYN0 398 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 SLCO2A1Q92959 643 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 C1orf74Q96LT6 269 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 NACA2Q9H009 215 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 ZDHHC7Q9NXF8 308 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 SLC12A6Q9UHW9 1150 aa18.85■□□□□ 0.61
HMGN1-206ENST00000431390 FEZ2Q9UHY8 353 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-206ENST00000431390 CCL16O15467 120 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 LIASO43766 372 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 CREB3O43889 395 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 FGF19O95750 216 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 GABRR2P28476 465 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 COG7P83436 770 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 DR1Q01658 176 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 DPYSQ14117 519 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 RFX8Q6ZV50 586 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 CCDC105Q8IYK2 499 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 PLD5Q8N7P1 536 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 ACTL9Q8TC94 416 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 GRK7Q8WTQ7 553 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 NKD2Q969F2 451 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-206ENST00000431390 BTN2A3PQ96KV6 586 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 ASAH2Q9NR71 780 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 ARHGEF4Q9NR80 690 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 FAM50BQ9Y247 325 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 HCFC2Q9Y5Z7 792 aa18.84■□□□□ 0.61
HMGN1-206ENST00000431390 FAM187AA6NFU0 413 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 FAM72CH0Y354 149 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 PER2O15055 1255 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 PFKLP17858 780 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 EPHA5P54756 1037 aa18.83■□□□□ 0.6
HMGN1-206ENST00000431390 TPI1P60174 286 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms