RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 FASTKD5Q7L8L6 764 aaKnown RBP4.54□□□□□ -1.68
HMGB3-203ENST00000430118 KCTD20Q7Z5Y7 419 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 TRABD2AQ86V40 505 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 NBPF5PQ86XG9 351 aaPredicted RBP4.54□□□□□ -1.68
HMGB3-203ENST00000430118 ZNF280BQ86YH2 543 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 DNAJC10Q8IXB1 793 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 SLC15A3Q8IY34 581 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 FAM109AQ8N4B1 249 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 PDILTQ8N807 584 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 ZMIZ2Q8NF64 920 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 CPT1CQ8TCG5 803 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 ADAMTS18Q8TE60 1221 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 PPP2R3CQ969Q6 453 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 C3orf49Q96BT1 292 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 NEUROD6Q96NK8 337 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 TEX13AQ9BXU3 409 aaPredicted RBP4.54□□□□□ -1.68
HMGB3-203ENST00000430118 AGXT2Q9BYV1 514 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 GPR63Q9BZJ6 419 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 CXorf36Q9H7Y0 433 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 OLA1Q9NTK5 396 aaKnown RBP4.54□□□□□ -1.68
HMGB3-203ENST00000430118 MRPS18AQ9NVS2 196 aaKnown RBP4.54□□□□□ -1.68
HMGB3-203ENST00000430118 IRAK4Q9NWZ3 460 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 NSMCE4AQ9NXX6 385 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 CLIC5Q9NZA1 410 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 KCNE5Q9UJ90 142 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 NDRG4Q9ULP0 352 aaKnown RBP4.54□□□□□ -1.68
HMGB3-203ENST00000430118 SMG5Q9UPR3 1016 aaKnown RBP4.54□□□□□ -1.68
HMGB3-203ENST00000430118 TBC1D30Q9Y2I9 924 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 SLC45A1Q9Y2W3 748 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 RRP7AQ9Y3A4 280 aaKnown RBP4.54□□□□□ -1.68
HMGB3-203ENST00000430118 TTLL3Q9Y4R7 772 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 AFG3L2Q9Y4W6 797 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 MRC1P22897 1456 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 ANKRD31Q8N7Z5 1873 aa4.54□□□□□ -1.68
HMGB3-203ENST00000430118 CASP8AP2Q9UKL3 1982 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 PRAMEF33A0A0G2JMD5 474 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 PRSS47A8MTI9 375 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 GOLGA6L6A8MZA4 724 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 E7EVH7 732 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 SEPT4O43236 478 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 TRIAP1O43715 76 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 PRAMEF10O60809 474 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 RAD17O75943 681 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 SUN1O94901 812 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 PRSS23O95084 383 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 CD19P15391 556 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 KLRK1P26718 216 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 PSMC2P35998 433 aaKnown RBP4.53□□□□□ -1.68
HMGB3-203ENST00000430118 TUBP50607 506 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 PGDP52209 483 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 SLURP1P55000 103 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 NR1H2P55055 460 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 LINC00310P59036 64 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 RPS6KA2Q15349 733 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 CST9Q5W186 159 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 ICE2Q659A1 982 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 TBC1D9BQ66K14 1250 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 ANO7Q6IWH7 933 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 ZNF280DQ6N043 979 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 ARMC6Q6NXE6 501 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 FBXO46Q6PJ61 603 aaPredicted RBP4.53□□□□□ -1.68
HMGB3-203ENST00000430118 FOXR2Q6PJQ5 311 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 TMEM108Q6UXF1 575 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 RASGRP2Q7LDG7 609 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 HEATR4Q86WZ0 1026 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 LRRC71Q8N4P6 559 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 TP53I13Q8NBR0 393 aaPredicted RBP4.53□□□□□ -1.68
HMGB3-203ENST00000430118 SUPT20HQ8NEM7 779 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 CEP70Q8NHQ1 597 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 SUN3Q8TAQ9 357 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 DNAJB14Q8TBM8 379 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 OVCA2Q8WZ82 227 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 ST8SIA4Q92187 359 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 GOLGA1Q92805 767 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 HVCN1Q96D96 273 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 ERP27Q96DN0 273 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 MARS2Q96GW9 593 aaKnown RBP4.53□□□□□ -1.68
HMGB3-203ENST00000430118 HIST1H2AAQ96QV6 131 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 SERINC2Q96SA4 455 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 REEP2Q9BRK0 252 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 MEGF9Q9H1U4 602 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 ABHD16BQ9H3Z7 469 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 USP22Q9UPT9 525 aa4.53□□□□□ -1.68
HMGB3-203ENST00000430118 SLX4Q8IY92 1834 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 A0A1B0GTL3 188 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 A0A1B0GTW7 788 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 FIBPO43427 364 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 CBFA2T3O75081 653 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 ZBED4O75132 1171 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 TAF5LO75529 589 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 FARP2O94887 1054 aaPredicted RBP4.52□□□□□ -1.69
HMGB3-203ENST00000430118 KRT1P04264 644 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 JUPP14923 745 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 CHMP24386 653 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 AKT1P31749 480 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 UQCRC1P31930 480 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 MAN2A2P49641 1150 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 NDUFV1P49821 464 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 GATMP50440 423 aa4.52□□□□□ -1.69
HMGB3-203ENST00000430118 RPS7P62081 194 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms