RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CNTNAP3BQ96NU0 1288 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 LSM14BQ9BX40 385 aaKnown RBP15.72■□□□□ 0.11
UBXN4-203ENST00000416538 CNTNAP3Q9BZ76 1288 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 CIPCQ9C0C6 399 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 ST7Q9NRC1 585 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 ABCB8Q9NUT2 735 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 APEX2Q9UBZ4 518 aa15.72■□□□□ 0.11
UBXN4-203ENST00000416538 EVLQ9UI08 416 aaPredicted RBP15.72■□□□□ 0.11
UBXN4-203ENST00000416538 THAP12O43422 761 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 FBXO21O94952 628 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 NCAM1P13591 858 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 PON1P27169 355 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 GNA15P30679 374 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 RING1Q06587 406 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 PDCLQ13371 301 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 TAF5Q15542 800 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 MEA1Q16626 185 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 HSP90AA4PQ58FG1 418 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 MIIPQ5JXC2 388 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 N4BP2L1Q5TBK1 243 aaPredicted RBP15.71■□□□□ 0.11
UBXN4-203ENST00000416538 PIK3R6Q5UE93 754 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 SDE2Q6IQ49 451 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 WDTC1Q8N5D0 677 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 FAM149B1Q96BN6 582 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 HSPA12BQ96MM6 686 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 SLC2A11Q9BYW1 496 aa15.71■□□□□ 0.11
UBXN4-203ENST00000416538 NUCKS1Q9H1E3 243 aaKnown RBP15.71■□□□□ 0.11
UBXN4-203ENST00000416538 USP36Q9P275 1121 aaKnown RBP15.71■□□□□ 0.11
UBXN4-203ENST00000416538 USP24Q9UPU5 2620 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 KMT2BQ9UMN6 2715 aaPredicted RBP15.7■□□□□ 0.1
UBXN4-203ENST00000416538 DOCK4Q8N1I0 1966 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 AP5Z1O43299 807 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 ACSL4O60488 711 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 KCNK5O95279 499 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 IGLV3-25P01717 112 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 PABPC1P11940 636 aaKnown RBP15.7■□□□□ 0.1
UBXN4-203ENST00000416538 RPS24P62847 133 aaKnown RBP15.7■□□□□ 0.1
UBXN4-203ENST00000416538 ZNF33AQ06730 810 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 BYSLQ13895 437 aaKnown RBP15.7■□□□□ 0.1
UBXN4-203ENST00000416538 SPDYCQ5MJ68 293 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 NUGGCQ68CJ6 796 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 GBP6Q6ZN66 633 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 CHST9Q7L1S5 443 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 CREBRFQ8IUR6 639 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 PASD1Q8IV76 773 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 MLKLQ8NB16 471 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 OR2I1PQ8NGU4 316 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 TMA16Q96EY4 203 aaKnown RBP15.7■□□□□ 0.1
UBXN4-203ENST00000416538 CPXM1Q96SM3 734 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 TMEM245Q9H330 911 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 PRDM16Q9HAZ2 1276 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 CAPN10Q9HC96 672 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 TMEM9BQ9NQ34 198 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 GGA2Q9UJY4 613 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 INTS6Q9UL03 887 aaKnown RBP15.7■□□□□ 0.1
UBXN4-203ENST00000416538 DOCK9Q9BZ29 2069 aa15.7■□□□□ 0.1
UBXN4-203ENST00000416538 GTPBP10A4D1E9 387 aaKnown RBP15.69■□□□□ 0.1
UBXN4-203ENST00000416538 IRAK2O43187 625 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 TBL1XO60907 577 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 ZNF217O75362 1048 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 FGFR1OPO95684 399 aaKnown RBP15.69■□□□□ 0.1
UBXN4-203ENST00000416538 ENGP17813 658 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 PMLP29590 882 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 MAPK8P45983 427 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 ZNF445P59923 1031 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 NNTQ13423 1086 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 EIF4EBP2Q13542 120 aaPredicted RBP15.69■□□□□ 0.1
UBXN4-203ENST00000416538 STARD3Q14849 445 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 EXOC3L4Q17RC7 722 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 PSAPL1Q6NUJ1 521 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 SLC23A3Q6PIS1 610 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 SERPINA13PQ6UXR4 307 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 SLC36A4Q6YBV0 504 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 ENOSF1Q7L5Y1 443 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 TMEM110Q86TL2 294 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 TMPRSS6Q8IU80 811 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 STK32AQ8WU08 396 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 UCMAQ8WVF2 138 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 MYO19Q96H55 970 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 SERPINB11Q96P15 392 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 MTG2Q9H4K7 406 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 TLR6Q9Y2C9 796 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 CEP295Q9C0D2 2601 aa15.69■□□□□ 0.1
UBXN4-203ENST00000416538 NPC1O15118 1278 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 MOCS2O96007 188 aaPredicted RBP15.68■□□□□ 0.1
UBXN4-203ENST00000416538 CFIP05156 583 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 EPHX1P07099 455 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 USP8P40818 1118 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 MTIF2P46199 727 aaKnown RBP15.68■□□□□ 0.1
UBXN4-203ENST00000416538 TPMTP51580 245 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 LMAN2Q12907 356 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 CAMK2GQ13555 558 aaPredicted RBP15.68■□□□□ 0.1
UBXN4-203ENST00000416538 MAN2A1Q16706 1144 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 FSCBQ5H9T9 825 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 OTUD1Q5VV17 481 aaPredicted RBP15.68■□□□□ 0.1
UBXN4-203ENST00000416538 MBLAC2Q68D91 279 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 MMS22LQ6ZRQ5 1243 aa15.68■□□□□ 0.1
UBXN4-203ENST00000416538 METTL3Q86U44 580 aaKnown RBP15.68■□□□□ 0.1
UBXN4-203ENST00000416538 C1orf131Q8NDD1 294 aaKnown RBP15.68■□□□□ 0.1
UBXN4-203ENST00000416538 WFIKKN2Q8TEU8 576 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms