RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 FAM169AQ9Y6X4 670 aa11.17□□□□□ -0.62
NEDD9-201ENST00000379433 ZSWIM8A7E2V4 1837 aa11.17□□□□□ -0.62
NEDD9-201ENST00000379433 A0A0B4J203 849 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 A0A1W2PPM1 405 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 FAM155BO75949 473 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 INMTO95050 263 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 NPR3P17342 541 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 HSD17B7P56937 341 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 SESN2P58004 480 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-201ENST00000379433 YWHAZP63104 245 aaKnown RBP11.16□□□□□ -0.62
NEDD9-201ENST00000379433 IRX4P78413 519 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 ERMARDQ5T6L9 678 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 RHBDF2Q6PJF5 856 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 FIP1L1Q6UN15 594 aaKnown RBP11.16□□□□□ -0.62
NEDD9-201ENST00000379433 KCNT2Q6UVM3 1135 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 CES3Q6UWW8 571 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 CLEC20AQ6ZU45 233 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 TRMT10CQ7L0Y3 403 aaKnown RBP11.16□□□□□ -0.62
NEDD9-201ENST00000379433 IGDCC3Q8IVU1 814 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 PDIK1LQ8N165 341 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 SLC35B2Q8TB61 432 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 CABS1Q96KC9 395 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 SCHIP1Q9P0W5 487 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-201ENST00000379433 NUDT17P0C025 328 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 GBP1P32455 592 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 STX2P32856 288 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 ARL4AP40617 200 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 ELK3P41970 407 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 GATMP50440 423 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 SLC10A2Q12908 348 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-201ENST00000379433 NUGGCQ68CJ6 796 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 ZNF280BQ86YH2 543 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 NIPA2Q8N8Q9 360 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 EIF1ADQ8N9N8 165 aaKnown RBP11.16□□□□□ -0.62
NEDD9-201ENST00000379433 CMASQ8NFW8 434 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-201ENST00000379433 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 ATXN7L3BQ96GX2 97 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 CAPNS2Q96L46 248 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 SLC4A5Q9BY07 1137 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 SLC12A6Q9UHW9 1150 aa11.16□□□□□ -0.62
NEDD9-201ENST00000379433 ENO4A6NNW6 628 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 TCP11X1B4DZS4 312 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 BHMG1C9JSJ3 638 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 BNIP1Q12981 228 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 MPP2Q14168 576 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 ARHGEF6Q15052 776 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 SEPT7Q16181 437 aaKnown RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 RNASEH2BQ5TBB1 312 aaKnown RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 CYP4V2Q6ZWL3 525 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 POLNQ7Z5Q5 900 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 ZNF354CQ86Y25 554 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 HACE1Q8IYU2 909 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 LRRC34Q8IZ02 419 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 PQLC3Q8N755 202 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 FBF1Q8TES7 1133 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 ASIC4Q96FT7 647 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 GLT1D1Q96MS3 346 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 XPO6Q96QU8 1125 aaKnown RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 KCTD15Q96SI1 283 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 FGFR1OP2Q9NVK5 253 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 KIAA1257Q9ULG3 409 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 TLL2Q9Y6L7 1015 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 FAM72CH0Y354 149 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 GPR182O15218 404 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 AMHP03971 560 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 AXLP30530 894 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 GRIK1P39086 918 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 SKOR1P84550 965 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 TFDP2Q14188 446 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 CRYMQ14894 314 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 MYBPC3Q14896 1274 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 BOLA3Q53S33 107 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 FAM72AQ5TYM5 149 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 FAM72DQ6L9T8 149 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 PAQR9Q6ZVX9 377 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 TAOK1Q7L7X3 1001 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 FAM72BQ86X60 149 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 ZCCHC9Q8N567 271 aaKnown RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 TNIP2Q8NFZ5 429 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 FAM81AQ8TBF8 368 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 PRCCQ92733 491 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 PCDH9Q9HC56 1237 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 PIGVQ9NUD9 493 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 GOLGA6L7A0A1B0GV03 622 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 GRXCR2A6NFK2 248 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 SCAMP3O14828 347 aaKnown RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 MSI1O43347 362 aaKnown RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 ITGAVP06756 1048 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 CA4P22748 312 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 PNPLA4P41247 253 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 GABRB2P47870 512 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 ARL4CP56559 192 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 COPS2P61201 443 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 TAGLNQ01995 201 aaKnown RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 COX10Q12887 443 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 LRRC23Q53EV4 343 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 AGBL2Q5U5Z8 902 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 UNC5BQ8IZJ1 945 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 PPM1NQ8N819 430 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 FNIP1Q8TF40 1166 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms