RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 PGAP3Q96FM1 320 aaPredicted RBP23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 TBCBQ99426 244 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 IRX2Q9BZI1 471 aaPredicted RBP23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 ZDHHC4Q9NPG8 344 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 PIGVQ9NUD9 493 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 STARD13Q9Y3M8 1113 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 MYO15AQ9UKN7 3530 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 CCR1P32246 355 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 SULT1E1P49888 294 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 DMWDQ09019 674 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 KLHL30Q0D2K2 578 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 PPP2R5DQ14738 602 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 GEN1Q17RS7 908 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 SLC25A52Q3SY17 297 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 MS4A13Q5J8X5 152 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 ALLCQ8N6M5 410 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 ATP6V0D2Q8N8Y2 350 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 ZBTB44Q8NCP5 570 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 CCDC26Q8TAB7 109 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 JOSD2Q8TAC2 188 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 CPLX3Q8WVH0 158 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 CFAP57Q96MR6 1250 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 PRMT1Q99873 361 aaKnown RBP23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 SLC2A11Q9BYW1 496 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 ANLNQ9NQW6 1124 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 STAP1Q9ULZ2 295 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 R4GN57 208 aa23.27■■□□□ 1.31
ECHDC1-203ENST00000368291 DOCK4Q8N1I0 1966 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 I6L893 689 aaPredicted RBP23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 DDX3XO00571 662 aaKnown RBP eCLIP23.26■■□□□ 1.317e-10■■■□□ 16
ECHDC1-203ENST00000368291 AP5Z1O43299 807 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 CALB1P05937 261 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 SLC2A3P11169 496 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 ATXN1P54253 815 aaKnown RBP23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 ZBED6P86452 979 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 C1QBPQ07021 282 aaKnown RBP23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 DMC1Q14565 340 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 MPP7Q5T2T1 576 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 RAP1GAP2Q684P5 730 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 MCOLN2Q8IZK6 566 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 CCDC33Q8N5R6 958 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 WFDC5Q8TCV5 224 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 SYN2Q92777 582 aaPredicted RBP23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 ACDQ96AP0 544 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 IQCDQ96DY2 449 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 DDX50Q9BQ39 737 aaKnown RBP23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 ZSCAN32Q9NX65 697 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 MMP17Q9ULZ9 603 aa23.26■■□□□ 1.31
ECHDC1-203ENST00000368291 C2CD4BA6NLJ0 364 aa23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 CBFA2T2O43439 604 aa23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 TBL1XO60907 577 aa23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 HNRNPLP14866 589 aaKnown RBP eCLIP23.25■■□□□ 1.311e-9■□□□□ 8.8
ECHDC1-203ENST00000368291 HOXA6P31267 233 aa23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 CXCR3P49682 368 aa23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 RPS24P62847 133 aaKnown RBP23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 TXNDC5Q8NBS9 432 aaKnown RBP23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 C3orf20Q8ND61 904 aa23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 RNF34Q969K3 372 aa23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 FAM122AQ96E09 287 aa23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 FAM126AQ9BYI3 521 aaPredicted RBP23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 ARHGEF38Q9NXL2 777 aa23.25■■□□□ 1.31
ECHDC1-203ENST00000368291 DMDP11532 3685 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 MUC22E2RYF6 1773 aaPredicted RBP23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 PROB1E7EW31 1015 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 SGK1O00141 431 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 LILRB5O75023 590 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 ADAM23O75077 832 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 ENDOD1O94919 500 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 KLF8O95600 359 aaPredicted RBP23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 ADCY5O95622 1261 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 TPM3P06753 285 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 ABCB4P21439 1286 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 TACR2P21452 398 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 HLA-FP30511 346 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 CASP14P31944 242 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 DEUP1Q05D60 604 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 RAB6CQ53S08 254 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 EGFLAMQ63HQ2 1017 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 TMEM215Q68D42 235 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 NUDT18Q6ZVK8 323 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 KIAA0907Q7Z7F0 614 aaPredicted RBP23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 DNAAF5Q86Y56 855 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 ZNF513Q8N8E2 541 aaPredicted RBP23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 KCNV2Q8TDN2 545 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 RXFP2Q8WXD0 754 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 RAB6CQ9H0N0 254 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 SLC8A2Q9UPR5 921 aa23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 LUC7L2Q9Y383 392 aaKnown RBP23.24■■□□□ 1.31
ECHDC1-203ENST00000368291 TMCO5BA8MYB1 307 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 RFC1P35251 1148 aaPredicted RBP23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 CCDC14Q49A88 953 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 HSF5Q4G112 596 aaPredicted RBP23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 TMEM92Q6UXU6 159 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 CHSY1Q86X52 802 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 LGI2Q8N0V4 545 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 CFAP52Q8N1V2 620 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 HJURPQ8NCD3 748 aaPredicted RBP23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 LMLNQ96KR4 655 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 HHIPQ96QV1 700 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 ACOX2Q99424 681 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms