RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 CERS4Q9HA82 394 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 NMUR1Q9HB89 426 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 MARCH2Q9P0N8 246 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 AMACRQ9UHK6 382 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 STOML2Q9UJZ1 356 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 USP18Q9UMW8 372 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 NAALADL1Q9UQQ1 740 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 NUP210Q8TEM1 1887 aaPredicted RBP9.84□□□□□ -0.83
C11orf54-201ENST00000331239 KCNU1A8MYU2 1149 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 M0QYT0 321 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 EBAG9O00559 213 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 FGGP02679 453 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 MIPP30301 263 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 HDAC4P56524 1084 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 MTMR3Q13615 1198 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 TAF5Q15542 800 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 C2CD6Q53TS8 623 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 SYPL2Q5VXT5 272 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 TTC19Q6DKK2 380 aaPredicted RBP9.84□□□□□ -0.83
C11orf54-201ENST00000331239 CES5AQ6NT32 575 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 TRNP1Q6NT89 227 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 HFE2Q6ZVN8 426 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 TMEM150AQ86TG1 271 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 PIWIL1Q96J94 861 aaKnown RBP9.84□□□□□ -0.83
C11orf54-201ENST00000331239 NEUROG2Q9H2A3 272 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 TRPV4Q9HBA0 871 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 ARHGAP26Q9UNA1 814 aa9.84□□□□□ -0.83
C11orf54-201ENST00000331239 HELZP42694 1942 aaKnown RBP9.84□□□□□ -0.83
C11orf54-201ENST00000331239 GOLGA6L10A0A0M3HER8 536 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 DDX3YO15523 660 aaKnown RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 TTI1O43156 1089 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 SOAT2O75908 522 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 APOEP02649 317 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 RHOP08100 348 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 ADRA1BP35368 520 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 UAP1Q16222 522 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 DPYSL2Q16555 572 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 C10orf120Q5SQS8 335 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 EMC10Q5UCC4 262 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 DCAF12L1Q5VU92 463 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 SDHAF4Q5VUM1 108 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 EMC1Q8N766 993 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 SEC14L1Q92503 715 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 SMG7Q92540 1137 aaKnown RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 BTN2A3PQ96KV6 586 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 CFAP57Q96MR6 1250 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 WDCPQ9H6R7 721 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 HOMER3Q9NSC5 361 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 DDIT4Q9NX09 232 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 DNMT3BQ9UBC3 853 aaKnown RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 CHORDC1Q9UHD1 332 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 MAGED2Q9UNF1 606 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 RAD54BQ9Y620 910 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 CCL16O15467 120 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 DAPK3O43293 454 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 MYZAPP0CAP1 466 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 ZFXP17010 805 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 GABRR2P28476 465 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 L1CAMP32004 1257 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 MAGEA9P43362 315 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 TBX4P57082 545 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 GRIN2CQ14957 1233 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 SKIDA1Q1XH10 827 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 PUS10Q3MIT2 529 aaKnown RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 C5orf22Q49AR2 442 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 EFHC2Q5JST6 749 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 ATAT1Q5SQI0 421 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 OTUD1Q5VV17 481 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 GAREM2Q75VX8 874 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 TAC4Q86UU9 113 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 ARFGAP1Q8N6T3 406 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 OTUB2Q96DC9 234 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 ZNF670Q9BS34 389 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 KLF16Q9BXK1 252 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 RABEP2Q9H5N1 569 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 PIDD1Q9HB75 910 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 ZNF334Q9HCZ1 680 aaPredicted RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 FAM114A2Q9NRY5 505 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 OSER1Q9NX31 292 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.83□□□□□ -0.841e-9■□□□□ 10.9
C11orf54-201ENST00000331239 FZD10Q9ULW2 581 aa9.83□□□□□ -0.84
C11orf54-201ENST00000331239 UTP11Q9Y3A2 253 aaKnown RBP9.83□□□□□ -0.84
C11orf54-201ENST00000331239 NOTCH4Q99466 2003 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 PIK3R2O00459 728 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 NDUFAB1O14561 156 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 GRAP2O75791 330 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 SPATA31D3P0C874 917 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 LSP1P33241 339 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 ARSEP51690 589 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 SPATA31D4Q6ZUB0 917 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 ZNF557Q8N988 423 aaPredicted RBP9.82□□□□□ -0.84
C11orf54-201ENST00000331239 FAF2Q96CS3 445 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 CORO1BQ9BR76 489 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 RAB17Q9H0T7 212 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 S1PR5Q9H228 398 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 PRDM12Q9H4Q4 367 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 TMBIM4Q9HC24 238 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 PPARGC1AQ9UBK2 798 aaKnown RBP9.82□□□□□ -0.84
C11orf54-201ENST00000331239 CXorf51AA0A1B0GTR3 108 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 E2F8A0AVK6 867 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms