RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 PPM1EQ8WY54 764 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 SUSD6Q92537 303 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 SMG7Q92540 1137 aaKnown RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 BTBD6Q96KE9 485 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 C16orf45Q96MC5 204 aaPredicted RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 GAS2L1Q99501 681 aaPredicted RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 PAIP2Q9BPZ3 127 aaKnown RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 FRMD8P1Q9BZ68 369 aaPredicted RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 PRDM12Q9H4Q4 367 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 L2HGDHQ9H9P8 463 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 CLEC1BQ9P126 229 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 RRP15Q9Y3B9 282 aaKnown RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 PDE4DIPQ5VU43 2346 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 IGLV3-10A0A075B6K4 115 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 CCDC195A0A1B0GUA6 201 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 RFXAPO00287 272 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 PER2O15055 1255 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 GREM1O60565 184 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 RFPL2O75678 378 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 FTCDO95954 541 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 ATP1A1P05023 1023 aaKnown RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 IVLP07476 585 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 SPATA31D3P0C874 917 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 IL1R2P27930 398 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 GABRR2P28476 465 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 TBX4P57082 545 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 SETDB1Q15047 1291 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 SPATA31D4Q6ZUB0 917 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 PHLDB2Q86SQ0 1253 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 ZNF683Q8IZ20 524 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 HS6ST3Q8IZP7 471 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 CPXM2Q8N436 756 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 ATP6V0D2Q8N8Y2 350 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 GPR152Q8TDT2 470 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 MAIP1Q8WWC4 291 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 ALG3Q92685 438 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 E2F7Q96AV8 911 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 BTN2A3PQ96KV6 586 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 RIPOR3Q96MK2 946 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 OSBPL9Q96SU4 736 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 PRMT1Q99873 361 aaKnown RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 SNRNP25Q9BV90 132 aaKnown RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 DDIT4Q9NX09 232 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 MTMR10Q9NXD2 777 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 PPARGC1AQ9UBK2 798 aaKnown RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 CHORDC1Q9UHD1 332 aaPredicted RBP6.48□□□□□ -1.37
CBWD3-210ENST00000614398 DNAI1Q9UI46 699 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 RAD54BQ9Y620 910 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 SAR1BQ9Y6B6 198 aa6.48□□□□□ -1.37
CBWD3-210ENST00000614398 CXorf51AA0A1B0GTR3 108 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 E2F8A0AVK6 867 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 APOEP02649 317 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 RARAP10276 462 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 TFE3P19532 575 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CETN2P41208 172 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CCR2P41597 374 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 RNASE9P60153 205 aaKnown RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 PITX1P78337 314 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 MAP9Q49MG5 647 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 EFHC2Q5JST6 749 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 C10orf120Q5SQS8 335 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 TTC39BQ5VTQ0 682 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 DCAF12L1Q5VU92 463 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 HTR3DQ70Z44 454 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 RSRC2Q7L4I2 434 aaKnown RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 MAP7D3Q8IWC1 876 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 EDEM1Q92611 657 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 KRT35Q92764 455 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 OTUB2Q96DC9 234 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 NAP1L3Q99457 506 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 DDX50Q9BQ39 737 aaKnown RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CORO1BQ9BR76 489 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CCSER2Q9H7U1 834 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 PCDH18Q9HCL0 1135 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 SLC12A6Q9UHW9 1150 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CDC23Q9UJX2 597 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 MAGED2Q9UNF1 606 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 AP4E1Q9UPM8 1137 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 COL4A2P08572 1712 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 DRGXA6NNA5 263 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 TMEM110-MUSTN1A8MSY1 372 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 FGF10O15520 208 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 TBX10O75333 385 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 STC2O76061 302 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 ZFXP17010 805 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 FSHRP23945 695 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 KDELR1P24390 212 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 LTBRP36941 435 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CDKN2BP42772 138 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 ATP11AP98196 1134 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CKAP4Q07065 602 aaKnown RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 ZSCAN26Q16670 478 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 HABP4Q5JVS0 413 aaKnown RBP6.47□□□□□ -1.37
CBWD3-210ENST00000614398 SH3PXD2AQ5TCZ1 1133 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 SPOCD1Q6ZMY3 1216 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CPNE8Q86YQ8 564 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CMTM8Q8IZV2 173 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 CCDC185Q8N715 623 aa6.47□□□□□ -1.37
CBWD3-210ENST00000614398 C12orf50Q8NA57 414 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms