RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MYO1AQ9UBC5 1043 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 STOML2Q9UJZ1 356 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 A0A0C4DFX4 3053 aa13.77□□□□□ -0.2
MDC1-209ENST00000613547 TCRBV5S1A1TA0A578 114 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 TYW5A2RUC4 315 aaKnown RBP13.77□□□□□ -0.21
MDC1-209ENST00000613547 KRBA1A5PL33 1030 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 ATMINO43313 823 aaPredicted RBP13.77□□□□□ -0.21
MDC1-209ENST00000613547 GJB6O95452 261 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 H2AFZP0C0S5 128 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 VCANP13611 3396 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 CTHP32929 405 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 GJA4P35212 333 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 ZNF143P52747 638 aaPredicted RBP13.77□□□□□ -0.21
MDC1-209ENST00000613547 GALCP54803 685 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 STARD6P59095 220 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 ATP11AP98196 1134 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 EIF4EBP2Q13542 120 aaPredicted RBP13.77□□□□□ -0.21
MDC1-209ENST00000613547 SPA17Q15506 151 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 ARL13BQ3SXY8 428 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 CCDC14Q49A88 953 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 PREPLQ4J6C6 727 aaPredicted RBP13.77□□□□□ -0.21
MDC1-209ENST00000613547 MPPE1Q53F39 396 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 PPP1R15BQ5SWA1 713 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 ACBD5Q5T8D3 534 aaPredicted RBP13.77□□□□□ -0.21
MDC1-209ENST00000613547 RHBDF2Q6PJF5 856 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 H2AFVQ71UI9 128 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 STRADAQ7RTN6 431 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 FAM3CQ92520 227 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 BAG1Q99933 345 aaPredicted RBP13.77□□□□□ -0.21
MDC1-209ENST00000613547 BBS2Q9BXC9 721 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 THAP2Q9H0W7 228 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 EPHX3Q9H6B9 360 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 TBC1D17Q9HA65 648 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 PIGVQ9NUD9 493 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 SPTLC3Q9NUV7 552 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 NENFQ9UMX5 172 aa13.77□□□□□ -0.21
MDC1-209ENST00000613547 KANSL1LA0AUZ9 987 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 TMEM191CA6NGB0 347 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 OTOL1A6NHN0 477 aaPredicted RBP13.76□□□□□ -0.21
MDC1-209ENST00000613547 KCNU1A8MYU2 1149 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.76□□□□□ -0.21
MDC1-209ENST00000613547 NEDD8-MDP1E9PL57 170 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 HOXC11O43248 304 aaPredicted RBP13.76□□□□□ -0.21
MDC1-209ENST00000613547 ENDOD1O94919 500 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 CYP1A2P05177 515 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 TFE3P19532 575 aaPredicted RBP13.76□□□□□ -0.21
MDC1-209ENST00000613547 PSMA2P25787 234 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 EIF2DP41214 584 aaKnown RBP13.76□□□□□ -0.21
MDC1-209ENST00000613547 SOX9P48436 509 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 CXCR3P49682 368 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 VCPP55072 806 aaKnown RBP13.76□□□□□ -0.21
MDC1-209ENST00000613547 RPL7AP62424 266 aaKnown RBP13.76□□□□□ -0.21
MDC1-209ENST00000613547 CDO1Q16878 200 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 TRNP1Q6NT89 227 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 TPGS1Q6ZTW0 290 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 DNAAF5Q86Y56 855 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 TMEM25Q86YD3 366 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 FAM217AQ8IXS0 508 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 FLCNQ8NFG4 579 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 XPO6Q96QU8 1125 aaKnown RBP13.76□□□□□ -0.21
MDC1-209ENST00000613547 NCAPGQ9BPX3 1015 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 MARK1Q9P0L2 795 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 LCMT1Q9UIC8 334 aa13.76□□□□□ -0.21
MDC1-209ENST00000613547 HELZP42694 1942 aaKnown RBP13.75□□□□□ -0.21
MDC1-209ENST00000613547 F5H5T6 163 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 NCAM2O15394 837 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 NRDCO43847 1150 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 RNF8O76064 485 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 FECHP22830 423 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 GRSF1Q12849 480 aaKnown RBP eCLIP13.75□□□□□ -0.21
MDC1-209ENST00000613547 UBXN2BQ14CS0 331 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 C15orf59Q2T9L4 293 aaPredicted RBP13.75□□□□□ -0.21
MDC1-209ENST00000613547 OTUD1Q5VV17 481 aaPredicted RBP13.75□□□□□ -0.21
MDC1-209ENST00000613547 NUDT18Q6ZVK8 323 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 BNIPLQ7Z465 357 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 BMP8AQ7Z5Y6 402 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 CHSY1Q86X52 802 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 CCDC117Q8IWD4 279 aaPredicted RBP13.75□□□□□ -0.21
MDC1-209ENST00000613547 SUGP1Q8IWZ8 645 aaKnown RBP13.75□□□□□ -0.21
MDC1-209ENST00000613547 ZNF557Q8N988 423 aaPredicted RBP13.75□□□□□ -0.21
MDC1-209ENST00000613547 FNIP1Q8TF40 1166 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 DDI1Q8WTU0 396 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 FAM172AQ8WUF8 416 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 CENPIQ92674 756 aaPredicted RBP13.75□□□□□ -0.21
MDC1-209ENST00000613547 CD101Q93033 1021 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 PBXIP1Q96AQ6 731 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 TMA16Q96EY4 203 aaKnown RBP13.75□□□□□ -0.21
MDC1-209ENST00000613547 P2RY13Q9BPV8 354 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 NUP85Q9BW27 656 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 TKTL2Q9H0I9 626 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 ARHGEF38Q9NXL2 777 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 CTTNBP2NLQ9P2B4 639 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 INTUQ9ULD6 942 aa13.75□□□□□ -0.21
MDC1-209ENST00000613547 EIF3CLB5ME19 914 aaKnown RBP13.74□□□□□ -0.21
MDC1-209ENST00000613547 CCP110O43303 1012 aa13.74□□□□□ -0.21
MDC1-209ENST00000613547 TSPAN3O60637 253 aa13.74□□□□□ -0.21
MDC1-209ENST00000613547 TMEM253P0C7T8 217 aa13.74□□□□□ -0.21
MDC1-209ENST00000613547 TYRP14679 529 aa13.74□□□□□ -0.21
MDC1-209ENST00000613547 CD72P21854 359 aa13.74□□□□□ -0.21
MDC1-209ENST00000613547 LRRC32Q14392 662 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms