RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 TAC1P20366 129 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 PRKCHP24723 683 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 NRLP54845 237 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 MTFR1Q15390 333 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 PDK4Q16654 411 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 HHATQ5VTY9 493 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 SYPL2Q5VXT5 272 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 DCLRE1AQ6PJP8 1040 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 FAM43BQ6ZT52 329 aaPredicted RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 RFX8Q6ZV50 586 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 SPATA21Q7Z572 469 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 LRRC6Q86X45 466 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 IGDCC3Q8IVU1 814 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 ZMIZ2Q8NF64 920 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 GDAP1Q8TB36 358 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 SLC7A14Q8TBB6 771 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 MZB1Q8WU39 189 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 ADAM2Q99965 735 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 NAT9Q9BTE0 207 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 OSBPL7Q9BZF2 842 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 PIGVQ9NUD9 493 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 FGFR1OP2Q9NVK5 253 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 ARL2BPQ9Y2Y0 163 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 COL4A4P53420 1690 aaPredicted RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 YJEFN3A6XGL0 299 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 FOXO6A8MYZ6 492 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 E7ENQ6 273 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 NRP1O14786 923 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 KRT37O76014 449 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 EOMESO95936 686 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 MT-ND3P03897 115 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 NCAM1P13591 858 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 MX2P20592 715 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 HOXD10P28358 340 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 CYP2C18P33260 490 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 LIG3P49916 1009 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 AFF1P51825 1210 aaKnown RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 SEMA3BQ13214 749 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 NME3Q13232 169 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 NOGQ13253 232 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 ITGA7Q13683 1181 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 SEPT7Q16181 437 aaKnown RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 PARP6Q2NL67 630 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 TRIM71Q2Q1W2 868 aaKnown RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 KBTBD12Q3ZCT8 623 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 ANKRD20A2Q5SQ80 823 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 ANKRD20A1Q5TYW2 823 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 TTC39BQ5VTQ0 682 aaPredicted RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 ANKRD20A3Q5VUR7 823 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 TRPM8Q7Z2W7 1104 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 PYROXD2Q8N2H3 581 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 NDRG1Q92597 394 aaKnown RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 MTBPQ96DY7 904 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 SUSD3Q96L08 255 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 EBNA1BP2Q99848 306 aaKnown RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 PITPNM3Q9BZ71 974 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 VPS11Q9H270 941 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 WDR6Q9NNW5 1121 aaKnown RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 DMAP1Q9NPF5 467 aaPredicted RBP12.34□□□□□ -0.43
USP6NL-206ENST00000609853 STARD13Q9Y3M8 1113 aa12.34□□□□□ -0.43
USP6NL-206ENST00000609853 PTPRDP23468 1912 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 A0A1W2PPM1 405 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 TMEM88BA6NKF7 163 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 DCLK1O15075 740 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 MGEA5O60502 916 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 SPAG7O75391 227 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 METTL18O95568 372 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 APOEP02649 317 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 CCND3P30281 292 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-206ENST00000609853 HTR7P34969 479 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 RPA3P35244 121 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-206ENST00000609853 CXCR3P49682 368 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 TSPY1Q01534 308 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 SP3Q02447 781 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 ZNF598Q86UK7 904 aaKnown RBP12.33□□□□□ -0.44
USP6NL-206ENST00000609853 ECHDC2Q86YB7 292 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 C4orf33Q8N1A6 199 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 BANPQ8N9N5 519 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 GSDMBQ8TAX9 411 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 LRRC8CQ8TDW0 803 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 RSPH1Q8WYR4 309 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 MYLPFQ96A32 169 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 SIGLEC10Q96LC7 697 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 EPAS1Q99814 870 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 RTP3Q9BQQ7 232 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 COLEC11Q9BWP8 271 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 MLXIPLQ9NP71 852 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 KLHL14Q9P2G3 628 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 IGSF9Q9P2J2 1179 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 TIMM13Q9Y5L4 95 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-206ENST00000609853 PATJQ8NI35 1801 aa12.33□□□□□ -0.44
USP6NL-206ENST00000609853 MOXD2PA6NHM9 499 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 H0YHG0 523 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 CREB3O43889 395 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 MFSD11O43934 449 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 AVILO75366 819 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 MAP3K6O95382 1288 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms