RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 GANQ9H2C0 597 aa22.77■■□□□ 1.24
PPFIA3-208ENST00000602726 HCN2Q9UL51 889 aa22.77■■□□□ 1.24
PPFIA3-208ENST00000602726 LGALS16A8MUM7 142 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 ACSL4O60488 711 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 GLI1P08151 1106 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 ZNF18P17022 549 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 WASP42768 502 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 POLR2FP61218 127 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 TAF5Q15542 800 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 USP39Q53GS9 565 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 OR6B2Q6IFH4 312 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 FAM160A2Q8N612 972 aaPredicted RBP22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 GPR161Q8N6U8 529 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 MDGA1Q8NFP4 955 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 AZIN2Q96A70 460 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 FCRL2Q96LA5 508 aaPredicted RBP22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 DDX50Q9BQ39 737 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 TPSD1Q9BZJ3 242 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 ASNSD1Q9NWL6 643 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 BCCIPQ9P287 314 aaKnown RBP eCLIP22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 SPAG17Q6Q759 2223 aa22.76■■□□□ 1.23
PPFIA3-208ENST00000602726 GOLGA6L7A0A1B0GV03 622 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 ERBB2P04626 1255 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 HOXB2P14652 356 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 HOXD9P28356 352 aaPredicted RBP22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 UBXN1Q04323 297 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 SYCP1Q15431 976 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 GEN1Q17RS7 908 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 PTPN20Q4JDL3 420 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 DCAF6Q58WW2 860 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 TAF3Q5VWG9 929 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 FAM183BPQ6ZVS7 135 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 ANKS1BQ7Z6G8 1248 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 KBTBD6Q86V97 674 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 PIWIL1Q96J94 861 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 CLEC4EQ9ULY5 219 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 SIK3Q9Y2K2 1263 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 DAAM1Q9Y4D1 1078 aa22.75■■□□□ 1.23
PPFIA3-208ENST00000602726 TCRBV21S2A2A0A5A6 115 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 LRRC10BA6NIK2 292 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 GFRA2O00451 464 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 IRAK2O43187 625 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 HSF2BPO75031 334 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 TRUB2O95900 331 aaKnown RBP22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 APOEP02649 317 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 CDK17Q00537 523 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 RFWD3Q6PCD5 774 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 NOP9Q86U38 636 aaKnown RBP22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 DEFB106AQ8N104 65 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 PGBD3Q8N328 593 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 UCMAQ8WVF2 138 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 HMGB4Q8WW32 186 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 SLC39A13Q96H72 371 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 SPAG5Q96R06 1193 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 ACOX2Q99424 681 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 IRX2Q9BZI1 471 aaPredicted RBP22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 HSD3B7Q9H2F3 369 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 NLRC4Q9NPP4 1024 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 EML5Q05BV3 1969 aa22.74■■□□□ 1.23
PPFIA3-208ENST00000602726 ZBTB24O43167 697 aaPredicted RBP22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 GRAP2O75791 330 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 GFPT2O94808 682 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 MOCS2O96007 188 aaPredicted RBP22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 SLC6A3Q01959 620 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 FAM133BQ5BKY9 247 aaKnown RBP22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 PIK3R6Q5UE93 754 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 OLFML1Q6UWY5 402 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 ZDHHC17Q8IUH5 632 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 NEK11Q8NG66 645 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 DDX1Q92499 740 aaKnown RBP22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 SLC2A13Q96QE2 648 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 BPIFA3Q9BQP9 254 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 FAM204AQ9H8W3 233 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 CACNA2D2Q9NY47 1150 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 USP18Q9UMW8 372 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 INVSQ9Y283 1065 aa22.73■■□□□ 1.23
PPFIA3-208ENST00000602726 SMTNL1A8MU46 457 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 DCLK1O15075 740 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 EPHB6O15197 1021 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 TBL1XO60907 577 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 LSM8O95777 96 aaKnown RBP22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 IGLV3-25P01717 112 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 SLC6A4P31645 630 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 GBP1P32455 592 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 CDH5P33151 784 aaPredicted RBP22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 SPEM2Q0P670 501 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 EIF4HQ15056 248 aaKnown RBP22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 E2F5Q15329 346 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 ELF2Q15723 593 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 ZC3H12AQ5D1E8 599 aaKnown RBP22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 MPP7Q5T2T1 576 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 NADSYN1Q6IA69 706 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 C11orf74Q86VG3 221 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 EPS8L1Q8TE68 723 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 LOXL4Q96JB6 756 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 ZC3H10Q96K80 434 aaKnown RBP22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 GABRG3Q99928 467 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 CIPCQ9C0C6 399 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 ELOVL2Q9NXB9 296 aa22.72■■□□□ 1.23
PPFIA3-208ENST00000602726 SLC12A6Q9UHW9 1150 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms