RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 RBSNQ9H1K0 784 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 CD248Q9HCU0 757 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 CD93Q9NPY3 652 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 TJP2Q9UDY2 1190 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 HBS1LQ9Y450 684 aaKnown RBP14.35□□□□□ -0.11
SCAF1-203ENST00000598359 PCDHGA5Q9Y5G8 931 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 ASPMQ8IZT6 3477 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 ABCA7Q8IZY2 2146 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
SCAF1-203ENST00000598359 PATE3B3GLJ2 98 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 SLC30A4O14863 429 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 MAP3K13O43283 966 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 CAVIN2O95810 425 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 CYBBP04839 570 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 PNMA6AP0CW24 399 aaPredicted RBP14.34□□□□□ -0.11
SCAF1-203ENST00000598359 NDUFV2P19404 249 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 KCNA4P22459 653 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 PON1P27169 355 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 HOXD9P28356 352 aaPredicted RBP14.34□□□□□ -0.11
SCAF1-203ENST00000598359 GNA15P30679 374 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 EXOC3L4Q17RC7 722 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 SDE2Q6IQ49 451 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 MSANTD2Q6P1R3 559 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 RFWD3Q6PCD5 774 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 GBP6Q6ZN66 633 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 CPXM2Q8N436 756 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 ADAM32Q8TC27 787 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 ZNF606Q8WXB4 792 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 IRGQQ8WZA9 623 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 HSFY1Q96LI6 401 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 GABRG3Q99928 467 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 NUP62CLQ9H1M0 184 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 SIX2Q9NPC8 291 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 VPS45Q9NRW7 570 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 NAALADL1Q9UQQ1 740 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 SLC27A6Q9Y2P4 619 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 STON1Q9Y6Q2 735 aa14.34□□□□□ -0.11
SCAF1-203ENST00000598359 FAM170AA1A519 330 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 E5RJQ4 531 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 FBXO21O94952 628 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 NCAM1P13591 858 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 IL12RB1P42701 662 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 PTGER3P43115 390 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 TMEM215Q68D42 235 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 CYP2U1Q7Z449 544 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 ANKS1BQ7Z6G8 1248 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 PASD1Q8IV76 773 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 PIGKQ92643 395 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 GOLGA1Q92805 767 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 FAM149B1Q96BN6 582 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 MYEOVQ96EZ4 313 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 SPACA7Q96KW9 195 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 PPP1R9BQ96SB3 815 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 CIPCQ9C0C6 399 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 APEX2Q9UBZ4 518 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 CYP8B1Q9UNU6 501 aa14.33□□□□□ -0.12
SCAF1-203ENST00000598359 ATXN2Q99700 1313 aaKnown RBP14.33□□□□□ -0.12
SCAF1-203ENST00000598359 FASNP49327 2511 aaKnown RBP14.33□□□□□ -0.12
SCAF1-203ENST00000598359 LAMA1P25391 3075 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 GFRA2O00451 464 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 PAPSS1O43252 624 aaPredicted RBP14.32□□□□□ -0.12
SCAF1-203ENST00000598359 IGLV3-27P01718 113 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 SLC6A4P31645 630 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 RPL34P49207 117 aaKnown RBP14.32□□□□□ -0.12
SCAF1-203ENST00000598359 TBX4P57082 545 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 TAF5Q15542 800 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 MPPE1Q53F39 396 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 FAM133BQ5BKY9 247 aaKnown RBP14.32□□□□□ -0.12
SCAF1-203ENST00000598359 PPM1JQ5JR12 505 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 MIIPQ5JXC2 388 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 ADGRF1Q5T601 910 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 STPG1Q5TH74 334 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 SYPL2Q5VXT5 272 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 NADSYN1Q6IA69 706 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 KIAA1324Q6UXG2 1013 aaKnown RBP14.32□□□□□ -0.12
SCAF1-203ENST00000598359 LPCAT2Q7L5N7 544 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 ENOSF1Q7L5Y1 443 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 C11orf74Q86VG3 221 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 WFDC5Q8TCV5 224 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 DQX1Q8TE96 717 aaKnown RBP14.32□□□□□ -0.12
SCAF1-203ENST00000598359 SHC3Q92529 594 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 TMA16Q96EY4 203 aaKnown RBP14.32□□□□□ -0.12
SCAF1-203ENST00000598359 FCRL2Q96LA5 508 aaPredicted RBP14.32□□□□□ -0.12
SCAF1-203ENST00000598359 SLC4A5Q9BY07 1137 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 THAP9Q9H5L6 903 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 ELOVL2Q9NXB9 296 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 THADAQ6YHU6 1953 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 FRYQ5TBA9 3013 aa14.32□□□□□ -0.12
SCAF1-203ENST00000598359 MED7O43513 233 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 MOCS2O96007 188 aaPredicted RBP14.31□□□□□ -0.12
SCAF1-203ENST00000598359 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
SCAF1-203ENST00000598359 PRKCHP24723 683 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 HLA-FP30511 346 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 PITX1P78337 314 aaPredicted RBP14.31□□□□□ -0.12
SCAF1-203ENST00000598359 RPL6Q02878 288 aaKnown RBP14.31□□□□□ -0.12
SCAF1-203ENST00000598359 CCDC173Q0VFZ6 552 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 ZNF234Q14588 700 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 MAN2A1Q16706 1144 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 FUT11Q495W5 492 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms