RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ESYT3A0FGR9 886 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 FAM72CH0Y354 149 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 GRM6O15303 877 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 TLR5O60602 858 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 TBX18O95935 607 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 KLRC2P26717 231 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 CLCN6P51797 869 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 EFEMP1Q12805 493 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 KCTD19Q17RG1 926 aaPredicted RBP21.54■■□□□ 1.04
PNKP-203ENST00000593946 C10orf120Q5SQS8 335 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 FAM72AQ5TYM5 149 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 FAM72DQ6L9T8 149 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 CCNI2Q6ZMN8 369 aaPredicted RBP21.54■■□□□ 1.04
PNKP-203ENST00000593946 FAM72BQ86X60 149 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 HAPLN3Q96S86 360 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 CDK5RAP1Q96SZ6 601 aaKnown RBP21.54■■□□□ 1.04
PNKP-203ENST00000593946 ERP44Q9BS26 406 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 OSBPL2Q9H1P3 480 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 CCSER2Q9H7U1 834 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 PRDM16Q9HAZ2 1276 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 ARHGEF4Q9NR80 690 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 MARCH2Q9P0N8 246 aa21.54■■□□□ 1.04
PNKP-203ENST00000593946 DRG1Q9Y295 367 aaKnown RBP21.54■■□□□ 1.04
PNKP-203ENST00000593946 YBX2Q9Y2T7 364 aaKnown RBP21.54■■□□□ 1.04
PNKP-203ENST00000593946 LAMA3Q16787 3333 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 DOCK4Q8N1I0 1966 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 ZNF840PA6NDX5 716 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 KCNU1A8MYU2 1149 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 MYBL2P10244 700 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 ZFXP17010 805 aaPredicted RBP21.53■■□□□ 1.04
PNKP-203ENST00000593946 HCAR3P49019 387 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 ZNF135P52742 658 aaPredicted RBP21.53■■□□□ 1.04
PNKP-203ENST00000593946 ERVK-21P61565 698 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 DPYSQ14117 519 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 NOMO1Q15155 1222 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 TAF12Q16514 161 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 DUPD1Q68J44 220 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 NPNTQ6UXI9 565 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 CCDC149Q6ZUS6 474 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 SYDE1Q6ZW31 735 aaPredicted RBP21.53■■□□□ 1.04
PNKP-203ENST00000593946 DNAJB7Q7Z6W7 309 aaPredicted RBP21.53■■□□□ 1.04
PNKP-203ENST00000593946 CASKIN2Q8WXE0 1202 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 FCRL2Q96LA5 508 aaPredicted RBP21.53■■□□□ 1.04
PNKP-203ENST00000593946 CCDC114Q96M63 670 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 UXTQ9UBK9 157 aaPredicted RBP21.53■■□□□ 1.04
PNKP-203ENST00000593946 NEU2Q9Y3R4 380 aa21.53■■□□□ 1.04
PNKP-203ENST00000593946 EEF2KO00418 725 aaKnown RBP21.52■■□□□ 1.04
PNKP-203ENST00000593946 CREB3O43889 395 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 CSPG5O95196 566 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 GAS8O95995 478 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 GLUD1P00367 558 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 ITGAVP06756 1048 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 SLC2A3P11169 496 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 LMNB2Q03252 620 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 TRIP4Q15650 581 aaPredicted RBP21.52■■□□□ 1.04
PNKP-203ENST00000593946 RFX8Q6ZV50 586 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 ITIH5Q86UX2 942 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 KREMEN2Q8NCW0 462 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 HNRNPLLQ8WVV9 542 aaKnown RBP21.52■■□□□ 1.04
PNKP-203ENST00000593946 P3H4Q92791 437 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 GDF15Q99988 308 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 TRPM5Q9NZQ8 1165 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 OR12D3Q9UGF7 316 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 ASB3Q9Y575 518 aa21.52■■□□□ 1.04
PNKP-203ENST00000593946 IGLV3-27P01718 113 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 AMPD1P23109 780 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 PPP3CCP48454 512 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 CLCN4P51793 760 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 TBX4P57082 545 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 TRADDQ15628 312 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 NCBP2-AS2Q69YL0 99 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 KLHDC10Q6PID8 442 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 TADA2BQ86TJ2 420 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 EPAS1Q99814 870 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 ZNF148Q9UQR1 794 aa21.52■■□□□ 1.03
PNKP-203ENST00000593946 DOCK6Q96HP0 2047 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 NUP205Q92621 2012 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 MCF2LO15068 1137 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 PAGE1O75459 146 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 ERLIN1O75477 346 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 C8AP07357 584 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 IRS1P35568 1242 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 CARSP49589 748 aaKnown RBP21.51■■□□□ 1.03
PNKP-203ENST00000593946 TUBP50607 506 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 DRG2P55039 364 aaKnown RBP21.51■■□□□ 1.03
PNKP-203ENST00000593946 CUL1Q13616 776 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 PTK6Q13882 451 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 PPP1R7Q15435 360 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 C1orf228Q6PIY5 440 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 MIB1Q86YT6 1006 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 EIF1ADQ8N9N8 165 aaKnown RBP21.51■■□□□ 1.03
PNKP-203ENST00000593946 ETNK2Q9NVF9 386 aa21.51■■□□□ 1.03
PNKP-203ENST00000593946 H3BNC9 293 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 DAPK3O43293 454 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 LPXNO60711 386 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 C1RP00736 705 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 PBX2P40425 430 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 TPI1P60174 286 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 EIF3EP60228 445 aaKnown RBP21.5■■□□□ 1.03
PNKP-203ENST00000593946 RING1Q06587 406 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms