RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 EHBP1Q8NDI1 1231 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 CCDC112Q8NEF3 446 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 ENOX1Q8TC92 643 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 UCMAQ8WVF2 138 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 TFAP2BQ92481 460 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 DDX1Q92499 740 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 ACOX2Q99424 681 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 INTS2Q9H0H0 1204 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 ST7Q9NRC1 585 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 RXFP3Q9NSD7 469 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 ABCC13Q9NSE7 274 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 IFNKQ9P0W0 207 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 CALCOCO1Q9P1Z2 691 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 SFMBT1Q9UHJ3 866 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 STARD13Q9Y3M8 1113 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 RAD54BQ9Y620 910 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 TP53BP1Q12888 1972 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 KHNYNO15037 678 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 CCP110O43303 1012 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 MSI1O43347 362 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 TSPAN3O60637 253 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 PENKP01210 267 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 LTFP02788 710 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 TPM1P09493 284 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 NDUFV2P19404 249 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 LIMK1P53667 647 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 MFAP3P55082 362 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 UBASH3AP57075 661 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 CNGA2Q16280 664 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 FYB2Q5VWT5 728 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 LYSMD4Q5XG99 296 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 PMF1Q6P1K2 205 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 KIAA1324Q6UXG2 1013 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 BHLHA9Q7RTU4 235 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 TMC6Q7Z403 805 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 CPXM2Q8N436 756 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 FRMD1Q8N878 549 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 OLIG1Q8TAK6 271 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 IPO4Q8TEX9 1081 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 KCTD13Q8WZ19 329 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 FAM149B1Q96BN6 582 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 CIPCQ9C0C6 399 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 XPO4Q9C0E2 1151 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 MIS12Q9H081 205 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 CYP8B1Q9UNU6 501 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 HBS1LQ9Y450 684 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 NFE2L3Q9Y4A8 694 aa10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 MUC22E2RYF6 1773 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-216ENST00000574344 NCOR2Q9Y618 2525 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 PATE3B3GLJ2 98 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 WASH3PC4AMC7 463 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 RNF225M0QZC1 329 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 MED7O43513 233 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 SYNCRIPO60506 623 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 NDUFS2O75306 463 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 ZNF217O75362 1048 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 TPM2P07951 284 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 CISD3P0C7P0 127 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 USP8P40818 1118 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 MTIF2P46199 727 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 MARSP56192 900 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 NCAPHQ15003 741 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 E2F5Q15329 346 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 TRIP4Q15650 581 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 GEN1Q17RS7 908 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 PKDCCQ504Y2 493 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 MPPE1Q53F39 396 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 KIAA1211LQ6NV74 962 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 SLC36A4Q6YBV0 504 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 DEFB119Q8N690 84 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 LMO3Q8TAP4 145 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 CLEC4CQ8WTT0 213 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 IRGQQ8WZA9 623 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 HSFY1Q96LI6 401 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 GABRG3Q99928 467 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 CRACR2AQ9BSW2 395 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 NUSAP1Q9BXS6 441 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 UBE2TQ9NPD8 197 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 MBD1Q9UIS9 605 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 RWDD2AQ9UIY3 292 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 HCN2Q9UL51 889 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 SLC27A6Q9Y2P4 619 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 STON1Q9Y6Q2 735 aa10.07□□□□□ -0.8
NPLOC4-216ENST00000574344 A0A1W2PQF6 199 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 LNP1A1A4G5 178 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 TYW5A2RUC4 315 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 C4orf47A7E2U8 309 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 GFRA2O00451 464 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 CAPN9O14815 690 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 THAP12O43422 761 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 FBXO21O94952 628 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 CFIP05156 583 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 NCAM1P13591 858 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 GNA15P30679 374 aa10.06□□□□□ -0.8
NPLOC4-216ENST00000574344 DPP6P42658 865 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms