RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 THUMPD3Q9BV44 507 aaKnown RBP11.12□□□□□ -0.63
UBFD1-205ENST00000566136 SPZ1Q9BXG8 430 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 DNAJC18Q9H819 358 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 GPAMQ9HCL2 828 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 TBC1D23Q9NUY8 699 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 ZC3H7BQ9UGR2 993 aaKnown RBP11.12□□□□□ -0.63
UBFD1-205ENST00000566136 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 ASB3Q9Y575 518 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 SESN1Q9Y6P5 492 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 TRIM49BA6NDI0 452 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 CCP110O43303 1012 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
UBFD1-205ENST00000566136 FAM155BO75949 473 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 CTSBP07858 339 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 CBX1P83916 185 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 PAK1Q13153 545 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 KRT31Q15323 416 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 SYCP1Q15431 976 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 IFI16Q16666 785 aaKnown RBP11.12□□□□□ -0.63
UBFD1-205ENST00000566136 ALG11Q2TAA5 492 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 USP39Q53GS9 565 aaKnown RBP11.12□□□□□ -0.63
UBFD1-205ENST00000566136 FAM69AQ5T7M9 428 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 TAF3Q5VWG9 929 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 ZNF610Q8N9Z0 462 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 NRG4Q8WWG1 115 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 CDCA5Q96FF9 252 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 FAM163AQ96GL9 167 aaPredicted RBP11.12□□□□□ -0.63
UBFD1-205ENST00000566136 C1orf43Q9BWL3 253 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 ZMYND12Q9H0C1 365 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 VPS16Q9H269 839 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 PABPC3Q9H361 631 aaKnown RBP11.12□□□□□ -0.63
UBFD1-205ENST00000566136 SMURF1Q9HCE7 757 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 TAB2Q9NYJ8 693 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 SEC63Q9UGP8 760 aaKnown RBP11.12□□□□□ -0.63
UBFD1-205ENST00000566136 ZNF281Q9Y2X9 895 aa11.12□□□□□ -0.63
UBFD1-205ENST00000566136 H7BY64 318 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 VWA5AO00534 786 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 CEP104O60308 925 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 CLASP2O75122 1294 aaKnown RBP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ENTPD3O75355 529 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 PRCPP42785 496 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 NT5C2P49902 561 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 RAD23AP54725 363 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 DEUP1Q05D60 604 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ADCY2Q08462 1091 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ZBTB41Q5SVQ8 909 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ZNF658Q5TYW1 1059 aaPredicted RBP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 DRICH1Q6PGQ1 229 aaPredicted RBP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 TUSC5Q8IXB3 177 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 WDTC1Q8N5D0 677 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 BANPQ8N9N5 519 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 RFWD2Q8NHY2 731 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 MAML1Q92585 1016 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ELMO3Q96BJ8 720 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ERO1AQ96HE7 468 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 WDR18Q9BV38 432 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 NOD2Q9HC29 1040 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 RIMKLBQ9ULI2 386 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 SGK1O00141 431 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ZSCAN12O43309 604 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 STX10O60499 249 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 GHRP10912 638 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ICAM3P32942 547 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 NONOQ15233 471 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 PAN2Q504Q3 1202 aaKnown RBP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 PRAMEF18Q5VWM3 479 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 INTS8Q75QN2 995 aaKnown RBP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 DHRS1Q96LJ7 313 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 FER1L6-AS2Q96M78 137 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 CDK15Q96Q40 435 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 L2HGDHQ9H9P8 463 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 COPS7BQ9H9Q2 264 aaPredicted RBP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 PCDHGC5Q9Y5F6 944 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 HS3ST4Q9Y661 456 aa11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ZNF646O15015 1829 aaPredicted RBP11.11□□□□□ -0.63
UBFD1-205ENST00000566136 ATP8B3O60423 1300 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 A0A0U1RQJ8 604 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 STX16-NPEPL1H3BU86 382 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 STX16O14662 325 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 N4BP3O15049 544 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 SCAMP1O15126 338 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 IPO7O95373 1038 aaKnown RBP11.1□□□□□ -0.63
UBFD1-205ENST00000566136 TUBBP07437 444 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 OR52Z1P0C646 297 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 CASP14P31944 242 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 PBX1P40424 430 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 BUD31P41223 144 aaPredicted RBP11.1□□□□□ -0.63
UBFD1-205ENST00000566136 DSC2Q02487 901 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 KIF5AQ12840 1032 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 TRIM25Q14258 630 aaKnown RBP11.1□□□□□ -0.63
UBFD1-205ENST00000566136 DUSP28Q4G0W2 176 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 FILIP1LQ4L180 1135 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 ODF2Q5BJF6 829 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 TMEM201Q5SNT2 666 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 TANGO2Q6ICL3 276 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 RGMBQ6NW40 437 aa11.1□□□□□ -0.63
UBFD1-205ENST00000566136 SPATA2LQ8IUW3 424 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms