RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ZNF446Q9NWS9 450 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 GRHL1Q9NZI5 618 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 MTUS1Q9ULD2 1270 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 MAGED2Q9UNF1 606 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 CDH23Q9H251 3354 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 LAMA3Q16787 3333 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 CCDC151A5D8V7 595 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 ZNF840PA6NDX5 716 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM187AA6NFU0 413 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 EPOPA6NHQ4 379 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 APOC4-APOC2K7ER74 178 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 DCLK1O15075 740 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 DAPK3O43293 454 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 MFSD11O43934 449 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 PAGE1O75459 146 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 SEC31AO94979 1220 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 MAP3K6O95382 1288 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 F9P00740 461 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 APOC2P02655 101 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 AMPD1P23109 780 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 IVDP26440 423 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 KLRC2P26717 231 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 RPL21P46778 160 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 CARSP49589 748 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 IRAK1P51617 712 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 NRLP54845 237 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 AIF1P55008 147 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 VCPP55072 806 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 GDF10P55107 478 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 CREMQ03060 361 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 GBE1Q04446 702 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 EFEMP1Q12805 493 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 PLD1Q13393 1074 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 PTK6Q13882 451 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 DHX34Q14147 1143 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 NOMO1Q15155 1222 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 BEND6Q5SZJ8 279 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM182AQ5T1J6 154 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 PIK3R6Q5UE93 754 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 DRICH1Q6PGQ1 229 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 C1orf228Q6PIY5 440 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 CCNI2Q6ZMN8 369 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 RFX8Q6ZV50 586 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 TMC7Q7Z402 723 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 TMC8Q8IU68 726 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 TP53INP2Q8IXH6 220 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 ZNF683Q8IZ20 524 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 ARHGAP18Q8N392 663 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 NPWQ8N729 165 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 MRPL43Q8N983 215 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 NETO2Q8NC67 525 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 AENQ8WTP8 325 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 LRRN4Q8WUT4 740 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 MAIP1Q8WWC4 291 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 RUBCNQ92622 972 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 PSMG2Q969U7 264 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 MYEOVQ96EZ4 313 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 OLFM3Q96PB7 478 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 GDF15Q99988 308 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 PBX4Q9BYU1 374 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 UBE2OQ9C0C9 1292 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 MTIF3Q9H2K0 278 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 DPH5Q9H2P9 285 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 EPB41L5Q9HCM4 733 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 TLR9Q9NR96 1032 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 TLR8Q9NR97 1041 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 RCOR3Q9P2K3 495 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 STK39Q9UEW8 545 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 MAFFQ9ULX9 164 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 TLR6Q9Y2C9 796 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 PCDHA11Q9Y5I1 949 aa7.15□□□□□ -1.26
TOPBP1-203ENST00000503464 TNRC18O15417 2968 aaPredicted RBP7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 C2orf78A6NCI8 922 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 PRRG1O14668 218 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 APOL1O14791 398 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 COCHO43405 550 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 CREB3O43889 395 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 TLR5O60602 858 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 LRIG2O94898 1065 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 OAS1P00973 400 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 F11P03951 625 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 ITGAVP06756 1048 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 C8AP07357 584 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 FAM153BP0C7A2 387 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 ZSCAN5DPP0CG00 497 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 CSH1P0DML2 217 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 CSH2P0DML3 217 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 ETS1P14921 441 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 DESP17661 470 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 TGM2P21980 687 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 HOXC13P31276 330 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 GBP1P32455 592 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 CA8P35219 290 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 CETN2P41208 172 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 PSEN1P49768 467 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 CLCN4P51793 760 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 ERVK-21P61565 698 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 UBE3AQ05086 875 aa7.14□□□□□ -1.27
TOPBP1-203ENST00000503464 NNTQ13423 1086 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms