RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 BEST1O76090 585 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 STK10O94804 968 aaKnown RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 FAM153BP0C7A2 387 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 USP17L7P0C7H9 530 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 RBP3P10745 1247 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 L1CAMP32004 1257 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 HTR7P34969 479 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 PBX3P40426 434 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 HCAR3P49019 387 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 PSEN1P49768 467 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 ARSEP51690 589 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 ERVFC1P60507 584 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 RPL10AP62906 217 aaKnown RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 DYNLT1P63172 113 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 GABPB1Q06547 395 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 ADCY1Q08828 1119 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 MRPL58Q14197 206 aaKnown RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 MORF4L2Q15014 288 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 NOMO1Q15155 1222 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 TAF5Q15542 800 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 OASLQ15646 514 aaKnown RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 PSMD5Q16401 504 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 FAM153CQ494X1 144 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 PPP6R3Q5H9R7 873 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 VARS2Q5ST30 1063 aaKnown RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 SH3PXD2AQ5TCZ1 1133 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 IZUMO3Q5VZ72 239 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 TPGS2Q68CL5 300 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 TRNP1Q6NT89 227 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 TMEM173Q86WV6 379 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 CEP57Q86XR8 500 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 NUP93Q8N1F7 819 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 MAFAQ8NHW3 353 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 SLC35B2Q8TB61 432 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 SLC7A14Q8TBB6 771 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 FBXO25Q8TCJ0 367 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 RNF34Q969K3 372 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 FAF2Q96CS3 445 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 PIWIL1Q96J94 861 aaKnown RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 PEBP4Q96S96 227 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 KCNK16Q96T55 309 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 PKMYT1Q99640 499 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 RTP3Q9BQQ7 232 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 FRMD8Q9BZ67 464 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 STMN4Q9H169 189 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 PABPC3Q9H361 631 aaKnown RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 WDCPQ9H6R7 721 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 OLA1Q9NTK5 396 aaKnown RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 ZDHHC18Q9NUE0 388 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 DONSONQ9NYP3 566 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 GRHL1Q9NZI5 618 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 HSFX1Q9UBD0 423 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 MTRRQ9UBK8 725 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 FAM153AQ9UHL3 310 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 TPX2Q9ULW0 747 aaKnown RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 ATP8A1Q9Y2Q0 1164 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 USP3Q9Y6I4 520 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 XIRP2A4UGR9 3374 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 PTPRDP23468 1912 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 HHLA1C9JL84 531 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 NCAM2O15394 837 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 GLUD1P00367 558 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 IFNB1P01574 187 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 POU2F2P09086 479 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 MYZAPP0CAP1 466 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 SLC2A3P11169 496 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 CPB1P15086 417 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 CYP2F1P24903 491 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 DNAJB1P25685 340 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 ECHS1P30084 290 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 ADRA1BP35368 520 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 HSD17B3P37058 310 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 GGCXP38435 758 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 ITGA8P53708 1063 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 NME3Q13232 169 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 CTC1Q2NKJ3 1217 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 TCEAL5Q5H9L2 206 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 BRMS1LQ5PSV4 323 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 PLPP4Q5VZY2 271 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 BSPRYQ5W0U4 402 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 SLC9A4Q6AI14 798 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 SLC8B1Q6J4K2 584 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 SPRED2Q7Z698 418 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 MON1AQ86VX9 555 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 SCN4BQ8IWT1 228 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 IQCKQ8N0W5 287 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 MICALL1Q8N3F8 863 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 ZMIZ2Q8NF64 920 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 BCL7CQ8WUZ0 217 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-214ENST00000495485 RIN2Q8WYP3 895 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-214ENST00000495485 ACSF2Q96CM8 615 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-214ENST00000495485 TTC25Q96NG3 672 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 ZIM3Q96PE6 472 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 CDK5RAP1Q96SZ6 601 aaKnown RBP10.62□□□□□ -0.71
HDAC3-214ENST00000495485 EPAS1Q99814 870 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 VN1R3Q9BXE9 311 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 ROPN1BQ9BZX4 212 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-214ENST00000495485 PHACTR1Q9C0D0 580 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 BRD8Q9H0E9 1235 aa10.62□□□□□ -0.71
HDAC3-214ENST00000495485 FAM204AQ9H8W3 233 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms