RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 CPXM2Q8N436 756 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 PDILTQ8N807 584 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 SPRYD3Q8NCJ5 442 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 TAF4BQ92750 862 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 BHMTQ93088 406 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 IGSF8Q969P0 613 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 USP28Q96RU2 1077 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 CDK5RAP1Q96SZ6 601 aaKnown RBP8.61□□□□□ -1.03
USP39-216ENST00000490193 EPAS1Q99814 870 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 C7orf25Q9BPX7 421 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 DCLK3Q9C098 648 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 ELOVL2Q9NXB9 296 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 CLIC5Q9NZA1 410 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 HMGXB4Q9UGU5 601 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.61□□□□□ -1.03
USP39-216ENST00000490193 USP3Q9Y6I4 520 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 PLXNA2O75051 1894 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 ASXL3Q9C0F0 2248 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 TENM4Q6N022 2769 aa8.61□□□□□ -1.03
USP39-216ENST00000490193 MDM4O15151 490 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 TIMM44O43615 452 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 STX6O43752 255 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 EXOC3O60645 756 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 ASS1P00966 412 aaKnown RBP8.6□□□□□ -1.03
USP39-216ENST00000490193 RPN1P04843 607 aaKnown RBP8.6□□□□□ -1.03
USP39-216ENST00000490193 ASPAP45381 313 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 ABCG1P45844 678 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 NASPP49321 788 aaPredicted RBP8.6□□□□□ -1.03
USP39-216ENST00000490193 CSNK1EP49674 416 aaKnown RBP8.6□□□□□ -1.03
USP39-216ENST00000490193 CCT8P50990 548 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 KIF11P52732 1056 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 ASIC1P78348 528 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 COG7P83436 770 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 CEBPZQ03701 1054 aaKnown RBP8.6□□□□□ -1.03
USP39-216ENST00000490193 ZBTB16Q05516 673 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 PDE4CQ08493 712 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 C19orf57Q0VDD7 668 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 BIRC3Q13489 604 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 TEAD4Q15561 434 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 KNOP1Q1ED39 458 aaKnown RBP8.6□□□□□ -1.03
USP39-216ENST00000490193 SGSM1Q2NKQ1 1148 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 KIF19Q2TAC6 998 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 ZACNQ401N2 412 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 C10orf120Q5SQS8 335 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 TMEM215Q68D42 235 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 UNC13DQ70J99 1090 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 SCD5Q86SK9 330 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 TMPRSS12Q86WS5 348 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 SLC9A9Q8IVB4 645 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 NELFCDQ8IXH7 590 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 C12orf29Q8N999 325 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 LSM14AQ8ND56 463 aaKnown RBP8.6□□□□□ -1.03
USP39-216ENST00000490193 ENGASEQ8NFI3 743 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 OR2T3Q8NH03 318 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 GOLGA5Q8TBA6 731 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 TMEM245Q9H330 911 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 FBRSQ9HAH7 460 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 TM9SF3Q9HD45 589 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 FAM49BQ9NUQ9 324 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 DMAC2Q9NW81 257 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 TFIP11Q9UBB9 837 aaKnown RBP8.6□□□□□ -1.03
USP39-216ENST00000490193 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.6□□□□□ -1.03
USP39-216ENST00000490193 ANKRD6Q9Y2G4 727 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 PCDHGA1Q9Y5H4 931 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 SNX11Q9Y5W9 270 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 SLCO1B1Q9Y6L6 691 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 KNTC1P50748 2209 aa8.6□□□□□ -1.03
USP39-216ENST00000490193 PTPRQQ9UMZ3 2332 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 MYLKQ15746 1914 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 PVALEFA0A1B0GWK0 134 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 ATXN7O15265 892 aaPredicted RBP8.59□□□□□ -1.03
USP39-216ENST00000490193 DFNA5O60443 496 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 TSPAN3O60637 253 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 C1QL1O75973 258 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 CYBBP04839 570 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 EPHX1P07099 455 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 RALAP11233 206 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 HLA-EP13747 358 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 TRIM21P19474 475 aaKnown RBP8.59□□□□□ -1.03
USP39-216ENST00000490193 SYT1P21579 422 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 CORO1AP31146 461 aaKnown RBP8.59□□□□□ -1.03
USP39-216ENST00000490193 ACSL1P33121 698 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 CTSKP43235 329 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 INAVAQ3KP66 663 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 SERPINA13PQ6UXR4 307 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 MARCH9Q86YJ5 346 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 IQUBQ8NA54 791 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 LINC00301Q8NCQ3 95 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 BIRC7Q96CA5 298 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 NXPE2Q96DL1 559 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 CYFIP2Q96F07 1278 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 CRELD1Q96HD1 420 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 TWNKQ96RR1 684 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 ORAI3Q9BRQ5 295 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 BACH2Q9BYV9 841 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 LHX5Q9H2C1 402 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 PRORYQ9H606 182 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 C6orf106Q9H6K1 298 aaPredicted RBP8.59□□□□□ -1.03
USP39-216ENST00000490193 MAGEF1Q9HAY2 307 aa8.59□□□□□ -1.03
USP39-216ENST00000490193 NAGPAQ9UK23 515 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms