RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 CD4P01730 458 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 EPHX2P34913 555 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 SERPINB9P50453 376 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 CLNS1AP54105 237 aaKnown RBP12.72□□□□□ -0.37
PTCD2-204ENST00000486995 SOX4Q06945 474 aaPredicted RBP12.72□□□□□ -0.37
PTCD2-204ENST00000486995 SLC25A52Q3SY17 297 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 EFHC1Q5JVL4 640 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 STEAP4Q687X5 459 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 RINLQ6ZS11 566 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 GPR142Q7Z601 462 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 ALYREFQ86V81 257 aaKnown RBP12.72□□□□□ -0.37
PTCD2-204ENST00000486995 NUDCD3Q8IVD9 361 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 ADGRF2Q8IZF7 708 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 NETO2Q8NC67 525 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 SH3TC2Q8TF17 1288 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 DEPDC1BQ8WUY9 529 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 C20orf27Q9GZN8 174 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 NMUR2Q9GZQ4 415 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 GOLGA2P5Q9HBQ8 144 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 ARHGEF4Q9NR80 690 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 KCNK4Q9NYG8 393 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 RALGAPA2Q2PPJ7 1873 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 PLXNB2O15031 1838 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 HACD1B0YJ81 288 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 TOP3BO95985 862 aaKnown RBP12.72□□□□□ -0.37
PTCD2-204ENST00000486995 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 FDFT1P37268 417 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 ARL4AP40617 200 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 PITX1P78337 314 aaPredicted RBP12.72□□□□□ -0.37
PTCD2-204ENST00000486995 HIC1Q14526 733 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 OTUD1Q5VV17 481 aaPredicted RBP12.72□□□□□ -0.37
PTCD2-204ENST00000486995 FAM91A1Q658Y4 838 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 COLGALT1Q8NBJ5 622 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 APPL2Q8NEU8 664 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 TINF2Q9BSI4 451 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 ABHD16BQ9H3Z7 469 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 TMPRSS4Q9NRS4 437 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 TAS2R1Q9NYW7 299 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 MORF4L1Q9UBU8 362 aa12.72□□□□□ -0.37
PTCD2-204ENST00000486995 CCDC195A0A1B0GUA6 201 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 SMIM35A0A1B0GVV1 85 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 MBLAC1A4D2B0 266 aaPredicted RBP12.71□□□□□ -0.37
PTCD2-204ENST00000486995 E7ENQ6 273 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 MFSD11O43934 449 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 SNNO75324 88 aaPredicted RBP12.71□□□□□ -0.37
PTCD2-204ENST00000486995 BPGMP07738 259 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 MLNP12872 115 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 SULT1E1P49888 294 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 SLC8A3P57103 927 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 CRADDP78560 199 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 SARNPP82979 210 aaKnown RBP12.71□□□□□ -0.37
PTCD2-204ENST00000486995 GRB14Q14449 540 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 PCBP1Q15365 356 aaKnown RBP eCLIP12.71□□□□□ -0.37
PTCD2-204ENST00000486995 XKR4Q5GH76 650 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 IQSEC1Q6DN90 963 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 DSTYKQ6XUX3 929 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 PIGZQ86VD9 579 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 ARID3BQ8IVW6 561 aaPredicted RBP12.71□□□□□ -0.37
PTCD2-204ENST00000486995 PDCD7Q8N8D1 485 aaKnown RBP12.71□□□□□ -0.37
PTCD2-204ENST00000486995 STKLD1Q8NE28 680 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 ARMCX1Q9P291 453 aa12.71□□□□□ -0.37
PTCD2-204ENST00000486995 RCOR3Q9P2K3 495 aaPredicted RBP12.71□□□□□ -0.37
PTCD2-204ENST00000486995 NRCAMQ92823 1304 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 SDR42E2A6NKP2 422 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 XPO1O14980 1071 aaKnown RBP12.71□□□□□ -0.38
PTCD2-204ENST00000486995 GYG2O15488 501 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 GSRP00390 522 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 CYP2C9P11712 490 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 KCNE1P15382 129 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 TAF6P49848 677 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 NIPAL4Q0D2K0 466 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 KHDC1Q4VXA5 237 aaKnown RBP12.71□□□□□ -0.38
PTCD2-204ENST00000486995 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 LRRC8BQ6P9F7 803 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 BNIPLQ7Z465 357 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 OSTM1Q86WC4 334 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 HACE1Q8IYU2 909 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 KIRREL3Q8IZU9 778 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 FBXO41Q8TF61 875 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 ARNTL2Q8WYA1 636 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 NT5C3BQ969T7 300 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 P2RY11Q96G91 374 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 ZNF560Q96MR9 790 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 PIH1D1Q9NWS0 290 aaKnown RBP12.71□□□□□ -0.38
PTCD2-204ENST00000486995 SLC17A6Q9P2U8 582 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 PIN4Q9Y237 131 aaKnown RBP12.71□□□□□ -0.38
PTCD2-204ENST00000486995 LRRC42Q9Y546 428 aa12.71□□□□□ -0.38
PTCD2-204ENST00000486995 CAPN14A8MX76 684 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 BIRC5O15392 142 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 DYNC1LI2O43237 492 aaPredicted RBP12.7□□□□□ -0.38
PTCD2-204ENST00000486995 BEST1O76090 585 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 RARBP10826 455 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 ESRRAP11474 423 aaPredicted RBP12.7□□□□□ -0.38
PTCD2-204ENST00000486995 CNTFP26441 200 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 PNPLA4P41247 253 aa12.7□□□□□ -0.38
PTCD2-204ENST00000486995 ADIGQ0VDE8 80 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms