RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ACSF2Q96CM8 615 aaPredicted RBP18.24■□□□□ 0.51
CHMP3-207ENST00000485465 DCLK3Q9C098 648 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 ZWILCHQ9H900 591 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 EPS15L1Q9UBC2 864 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 LSM7Q9UK45 103 aaKnown RBP18.24■□□□□ 0.51
CHMP3-207ENST00000485465 FZD10Q9ULW2 581 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 SH3BP1Q9Y3L3 701 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 E2F8A0AVK6 867 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 I6L893 689 aaPredicted RBP18.23■□□□□ 0.51
CHMP3-207ENST00000485465 MOCS2O96007 188 aaPredicted RBP18.23■□□□□ 0.51
CHMP3-207ENST00000485465 TNNT1P13805 278 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 FCARP24071 287 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 VIPR2P41587 438 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 TFF2Q03403 129 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 SCAPQ12770 1279 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 USP4Q13107 963 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 MTA1Q13330 715 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 ZNF77Q15935 545 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 ERMARDQ5T6L9 678 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 LRRC38Q5VT99 294 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 HTR3DQ70Z44 454 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 RHOT1Q8IXI2 618 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 SLC35F6Q8N357 371 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 TTC16Q8NEE8 873 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 RIN3Q8TB24 985 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 UBE2Q2Q8WVN8 375 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 AZIN2Q96A70 460 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 RSPRY1Q96DX4 576 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 BTN2A3PQ96KV6 586 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 HAPLN3Q96S86 360 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 SNRNP25Q9BV90 132 aaKnown RBP18.23■□□□□ 0.51
CHMP3-207ENST00000485465 PHF7Q9BWX1 381 aaPredicted RBP18.23■□□□□ 0.51
CHMP3-207ENST00000485465 TMPRSS4Q9NRS4 437 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 OBP2AQ9NY56 170 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 AGO1Q9UL18 857 aaKnown RBP18.23■□□□□ 0.51
CHMP3-207ENST00000485465 FAM50BQ9Y247 325 aa18.23■□□□□ 0.51
CHMP3-207ENST00000485465 PSTPIP1O43586 416 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 PAGE1O75459 146 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 KRT7P08729 469 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 RARAP10276 462 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 MSNP26038 577 aaKnown RBP18.22■□□□□ 0.51
CHMP3-207ENST00000485465 CTNNA2P26232 953 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 GJC1P36383 396 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 SLC11A2P49281 568 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 GNG11P61952 73 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 KCNT1Q5JUK3 1230 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 MEI1Q5TIA1 1274 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 TANGO2Q6ICL3 276 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 Q6ZNB5 142 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 POLNQ7Z5Q5 900 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 PSTKQ8IV42 348 aaKnown RBP18.22■□□□□ 0.51
CHMP3-207ENST00000485465 DENND1CQ8IV53 801 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 TEKT4Q8WW24 435 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 E2F7Q96AV8 911 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 LRRC3BQ96PB8 259 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 ZFP14Q9HCL3 533 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 XPO7Q9UIA9 1087 aaKnown RBP18.22■□□□□ 0.51
CHMP3-207ENST00000485465 ZNF510Q9Y2H8 683 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 PCDHA3Q9Y5H8 950 aa18.22■□□□□ 0.51
CHMP3-207ENST00000485465 HEPACAM2A8MVW5 462 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 MIF4GDA9UHW6 222 aaKnown RBP18.21■□□□□ 0.51
CHMP3-207ENST00000485465 ACSL4O60488 711 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 LATS1O95835 1130 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 SP100P23497 879 aaPredicted RBP18.21■□□□□ 0.51
CHMP3-207ENST00000485465 CTNNA1P35221 906 aaKnown RBP18.21■□□□□ 0.51
CHMP3-207ENST00000485465 SMTNL2Q2TAL5 461 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 ATP13A4Q4VNC1 1196 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 EFHC2Q5JST6 749 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 PARM1Q6UWI2 310 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 KIAA1958Q8N8K9 716 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 TDRD5Q8NAT2 981 aaKnown RBP18.21■□□□□ 0.51
CHMP3-207ENST00000485465 HSPH1Q92598 858 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 KRT35Q92764 455 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 HES6Q96HZ4 224 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 OSBPL2Q9H1P3 480 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 GPATCH2LQ9NWQ4 482 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 STOML2Q9UJZ1 356 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 PACSIN2Q9UNF0 486 aaPredicted RBP18.21■□□□□ 0.51
CHMP3-207ENST00000485465 AP4E1Q9UPM8 1137 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 NR2E1Q9Y466 385 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 HS3ST4Q9Y661 456 aa18.21■□□□□ 0.51
CHMP3-207ENST00000485465 NUP210Q8TEM1 1887 aaPredicted RBP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 HELZP42694 1942 aaKnown RBP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 CCDC66A2RUB6 948 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 C2CD4DB7Z1M9 353 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 SCAMP3O14828 347 aaKnown RBP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 MARCKSL1P49006 195 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 MLLT6P55198 1093 aaPredicted RBP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 CA9Q16790 459 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 MS4A13Q5J8X5 152 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 ACBD5Q5T8D3 534 aaPredicted RBP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 PIK3R6Q5UE93 754 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 NADSYN1Q6IA69 706 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 NYAP1Q6ZVC0 841 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 MTSS1LQ765P7 747 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 ST13P5Q8NFI4 369 aaPredicted RBP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 BPIFB1Q8TDL5 484 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 ELSPBP1Q96BH3 223 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 C1orf74Q96LT6 269 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 MAGEB5Q9BZ81 275 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms