RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 COLGALT1Q8NBJ5 622 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 B3GALNT2Q8NCR0 500 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 MSANTD4Q8NCY6 345 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 KIAA1524Q8TCG1 905 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 ZNF606Q8WXB4 792 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 MYLIPQ8WY64 445 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 DDX1Q92499 740 aaKnown RBP7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 CRELD1Q96HD1 420 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 PPP1R13BQ96KQ4 1090 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 TSGA10Q9BZW7 698 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 NKX2-4Q9H2Z4 354 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 DPEP3Q9H4B8 488 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 FAM49BQ9NUQ9 324 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 HESX1Q9UBX0 185 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 STK39Q9UEW8 545 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 TSPAN16Q9UKR8 245 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 CDH9Q9ULB4 789 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 KIAA1257Q9ULG3 409 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 PPP2R2CQ9Y2T4 447 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 INSL6Q9Y581 213 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 TIMM13Q9Y5L4 95 aaPredicted RBP7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 DENND4AQ7Z401 1863 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 C2orf16Q68DN1 1984 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 PRUNE2Q8WUY3 3088 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 GREB1Q4ZG55 1949 aa7.27□□□□□ -1.25
GTF2A1-202ENST00000434192 NT5C1B-RDH14C9J2C7 533 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 H3BS24 57 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 ZNF263O14978 683 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 HCRTO43612 131 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 KRT86O43790 486 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 CALCAP01258 141 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 URODP06132 367 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 PDGFRBP09619 1106 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 CCDC130P13994 396 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 CHRNB2P17787 502 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 IGFBP6P24592 240 aaPredicted RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 ACAT1P24752 427 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 TKTP29401 623 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 RABGGTBP53611 331 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 BCAT1P54687 386 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 KIF5AQ12840 1032 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 MAPRE1Q15691 268 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 CLEC16AQ2KHT3 1053 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 MDH1BQ5I0G3 518 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 FAM171A1Q5VUB5 890 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 NAA35Q5VZE5 725 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 ARHGAP17Q68EM7 881 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 ATG4DQ86TL0 474 aaPredicted RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 PALB2Q86YC2 1186 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 CCAR2Q8N163 923 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 CRYBG2Q8N1P7 616 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 SLC39A11Q8N1S5 342 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 TMEM35BQ8NCS4 154 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 C1orf131Q8NDD1 294 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 MAFAQ8NHW3 353 aaPredicted RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 SLC30A5Q8TAD4 765 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 OLIG1Q8TAK6 271 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 IPO4Q8TEX9 1081 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 CTNNBL1Q8WYA6 563 aaPredicted RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 TFAP2BQ92481 460 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 IGSF21Q96ID5 467 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 NOX5Q96PH1 765 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 RAD9AQ99638 391 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 ACBD6Q9BR61 282 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 HERC2P3Q9BVR0 1158 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 ZNF518BQ9C0D4 1074 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 SLC28A3Q9HAS3 691 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 ATP13A1Q9HD20 1204 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 KCND1Q9NSA2 647 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 NENFQ9UMX5 172 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 REXO2Q9Y3B8 237 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 RWDD3Q9Y3V2 267 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 NME7Q9Y5B8 376 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 PCDHB12Q9Y5F1 795 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 PCDHA13Q9Y5I0 950 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 CORINQ9Y5Q5 1042 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 ZNF638Q14966 1978 aaKnown RBP7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 OBSL1O75147 1896 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 NCANO14594 1321 aa7.26□□□□□ -1.25
GTF2A1-202ENST00000434192 UNC80Q8N2C7 3258 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 ANKRD62A6NC57 917 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 OR6C75A6NL08 312 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 TMCO5BA8MYB1 307 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 H7C4K7 107 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 RTN2O75298 545 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 PF4P02776 101 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 SOD2P04179 222 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 CYP1A1P04798 512 aaPredicted RBP7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 CA3P07451 260 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 H2AFZP0C0S5 128 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 FAM200BP0CF97 657 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 SETSIPP0DME0 302 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 MYBL1P10243 752 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 GZMAP12544 262 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 UNGP13051 313 aaPredicted RBP7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 MYOGP15173 224 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 PTPN1P18031 435 aaKnown RBP7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 ABCB4P21439 1286 aa7.25□□□□□ -1.25
GTF2A1-202ENST00000434192 LMO2P25791 158 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms