RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 FAF2Q96CS3 445 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 SERPINB11Q96P15 392 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 KLHL5Q96PQ7 755 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 NACA2Q9H009 215 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 CERS4Q9HA82 394 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 ETNK2Q9NVF9 386 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 CLIC5Q9NZA1 410 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 HSFX1Q9UBD0 423 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 OR12D3Q9UGF7 316 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 XPO7Q9UIA9 1087 aaKnown RBP12.9□□□□□ -0.34
CHMP3-204ENST00000409727 NR2E3Q9Y5X4 410 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 GREB1Q4ZG55 1949 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 COL4A4P53420 1690 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-204ENST00000409727 MCF2LO15068 1137 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 TLR5O60602 858 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 IFNB1P01574 187 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 ADH1AP07327 375 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 ZSCAN5DPP0CG00 497 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 ETS1P14921 441 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 PBX2P40425 430 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
CHMP3-204ENST00000409727 PSEN1P49768 467 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 EPHB3P54753 998 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 AIF1P55008 147 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 TBX4P57082 545 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 TPI1P60174 286 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 GBE1Q04446 702 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 SCAPQ12770 1279 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 DUPD1Q68J44 220 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 SLC9A4Q6AI14 798 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 RFX8Q6ZV50 586 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 DNAJB7Q7Z6W7 309 aaPredicted RBP12.89□□□□□ -0.35
CHMP3-204ENST00000409727 TCEAL8Q8IYN2 117 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 GLIS1Q8NBF1 620 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 SLC35B2Q8TB61 432 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 RUBCNQ92622 972 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 TTLL2Q9BWV7 592 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 EMILIN2Q9BXX0 1053 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 UBE2OQ9C0C9 1292 aaKnown RBP12.89□□□□□ -0.35
CHMP3-204ENST00000409727 ARHGEF4Q9NR80 690 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 TLR9Q9NR96 1032 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 ZNF446Q9NWS9 450 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 COMMD8Q9NX08 183 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 MARCH2Q9P0N8 246 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 FEZ2Q9UHY8 353 aaPredicted RBP12.89□□□□□ -0.35
CHMP3-204ENST00000409727 RWDD3Q9Y3V2 267 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 SLC12A8A0AV02 714 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 C2orf71A6NGG8 1288 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 H7C0C1 242 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 GRM6O15303 877 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 PAGE1O75459 146 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 KRT14P02533 472 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 FAM153BP0C7A2 387 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 TGM2P21980 687 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 IRS1P35568 1242 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 ATP5OP48047 213 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 GDF10P55107 478 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 EIF4EBP2Q13542 120 aaPredicted RBP12.89□□□□□ -0.35
CHMP3-204ENST00000409727 OASLQ15646 514 aaKnown RBP12.89□□□□□ -0.35
CHMP3-204ENST00000409727 FAM153CQ494X1 144 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 MAP9Q49MG5 647 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 NCBP2-AS2Q69YL0 99 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 RWDD4Q6NW29 188 aaKnown RBP12.89□□□□□ -0.35
CHMP3-204ENST00000409727 MSANTD2Q6P1R3 559 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 DARS2Q6PI48 645 aaKnown RBP12.89□□□□□ -0.35
CHMP3-204ENST00000409727 NEUROG2Q9H2A3 272 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 ARHGEF38Q9NXL2 777 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 FAM153AQ9UHL3 310 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 TLR6Q9Y2C9 796 aa12.89□□□□□ -0.35
CHMP3-204ENST00000409727 ZNF840PA6NDX5 716 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 ITGAVP06756 1048 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 ZDHHC11BP0C7U3 371 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 RBP3P10745 1247 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 TNFRSF8P28908 595 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 ADCY8P40145 1251 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 NRLP54845 237 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 LMNB2Q03252 620 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 SLC10A2Q12908 348 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-204ENST00000409727 NOMO1Q15155 1222 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 BRMS1LQ5PSV4 323 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 BEND6Q5SZJ8 279 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-204ENST00000409727 DRICH1Q6PGQ1 229 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-204ENST00000409727 VSIG1Q86XK7 387 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 TAB3Q8N5C8 712 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-204ENST00000409727 ALLCQ8N6M5 410 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 MRPL43Q8N983 215 aaKnown RBP12.88□□□□□ -0.35
CHMP3-204ENST00000409727 RSAD2Q8WXG1 361 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 SLCO2A1Q92959 643 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 NKD2Q969F2 451 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-204ENST00000409727 FCRL2Q96LA5 508 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-204ENST00000409727 OLA1Q9NTK5 396 aaKnown RBP12.88□□□□□ -0.35
CHMP3-204ENST00000409727 LZTS1Q9Y250 596 aa12.88□□□□□ -0.35
CHMP3-204ENST00000409727 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
CHMP3-204ENST00000409727 ZNF487B1APH4 448 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 MFSD11O43934 449 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 LPXNO60711 386 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 LRIG2O94898 1065 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 GLUD1P00367 558 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 LRG1P02750 347 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 C8AP07357 584 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms