RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 RABGGTBP53611 331 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 PITX1P78337 314 aaPredicted RBP13.26□□□□□ -0.29
GPC3-201ENST00000370818 MRPS5P82675 430 aaKnown RBP13.26□□□□□ -0.29
GPC3-201ENST00000370818 MTM1Q13496 603 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 MPP2Q14168 576 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 SLC25A52Q3SY17 297 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 CAPN12Q6ZSI9 719 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 STRADAQ7RTN6 431 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 ZNF513Q8N8E2 541 aaPredicted RBP13.26□□□□□ -0.29
GPC3-201ENST00000370818 LRRN4Q8WUT4 740 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 MAML1Q92585 1016 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 NT5C3BQ969T7 300 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 FAM149B1Q96BN6 582 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 RTP4Q96DX8 246 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 KCTD15Q96SI1 283 aaPredicted RBP13.26□□□□□ -0.29
GPC3-201ENST00000370818 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.26□□□□□ -0.295e-23■■■□□ 14.8
GPC3-201ENST00000370818 RNF186Q9NXI6 227 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 PRKAG3Q9UGI9 489 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 ARL2BPQ9Y2Y0 163 aa13.26□□□□□ -0.29
GPC3-201ENST00000370818 TMEM120BA0PK00 339 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 MYBPHLA2RUH7 354 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 ZSCAN9O15535 394 aaPredicted RBP13.25□□□□□ -0.29
GPC3-201ENST00000370818 ACADSP16219 412 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 RBL1P28749 1068 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 SKIV2L2P42285 1042 aaKnown RBP13.25□□□□□ -0.29
GPC3-201ENST00000370818 ARL4CP56559 192 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 YWHAZP63104 245 aaKnown RBP13.25□□□□□ -0.29
GPC3-201ENST00000370818 SLC10A2Q12908 348 aaPredicted RBP13.25□□□□□ -0.29
GPC3-201ENST00000370818 UPP1Q16831 310 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 FOXB2Q5VYV0 432 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 BNIPLQ7Z465 357 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 LONP2Q86WA8 852 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 FAM131BQ86XD5 332 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 FAM136AQ96C01 138 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 PCED1BQ96HM7 432 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 HHIPL1Q96JK4 782 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 VPS37BQ9H9H4 285 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 KRT82Q9NSB4 513 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 XPO7Q9UIA9 1087 aaKnown RBP13.25□□□□□ -0.29
GPC3-201ENST00000370818 BCLAF3A2AJT9 711 aaKnown RBP13.25□□□□□ -0.29
GPC3-201ENST00000370818 TCP11X1B4DZS4 312 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 KCNN4O15554 427 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 ZNF623O75123 536 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 GM2AP17900 193 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 CST5P28325 142 aaPredicted RBP13.25□□□□□ -0.29
GPC3-201ENST00000370818 LHX1P48742 406 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 CACNA2D1P54289 1103 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 MAP3K7CLP57077 242 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 GBE1Q04446 702 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 DYNC1I2Q13409 638 aaKnown RBP13.25□□□□□ -0.29
GPC3-201ENST00000370818 DSC3Q14574 896 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 KCNJ11Q14654 390 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 LPIN1Q14693 890 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 TIGD5Q53EQ6 642 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 DCAF6Q58WW2 860 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 TDRPQ86YL5 185 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 RBM12BQ8IXT5 1001 aaKnown RBP13.25□□□□□ -0.29
GPC3-201ENST00000370818 PYROXD2Q8N2H3 581 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 TMEM86AQ8N2M4 240 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 CSPG4P5Q96PW8 444 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 USP3Q9Y6I4 520 aa13.25□□□□□ -0.29
GPC3-201ENST00000370818 PDLIM1O00151 329 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 SMAPO00193 183 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 DAB1O75553 588 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 UNC5CO95185 931 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 ALDH1A1P00352 501 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 RPLP2P05387 115 aaKnown RBP13.24□□□□□ -0.29
GPC3-201ENST00000370818 FAM200BP0CF97 657 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 SSTR1P30872 391 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 RPL9P32969 192 aaKnown RBP13.24□□□□□ -0.29
GPC3-201ENST00000370818 SYPL2Q5VXT5 272 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 HFE2Q6ZVN8 426 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 RIBC1Q8N443 379 aaPredicted RBP13.24□□□□□ -0.29
GPC3-201ENST00000370818 ANKLE1Q8NAG6 615 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 ZMIZ2Q8NF64 920 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 RAB3IPQ96QF0 476 aaPredicted RBP13.24□□□□□ -0.29
GPC3-201ENST00000370818 SMOQ99835 787 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 MED10Q9BTT4 135 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 ETNK1Q9HBU6 452 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 LRRC4Q9HBW1 653 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 TRMT13Q9NUP7 481 aaKnown RBP13.24□□□□□ -0.29
GPC3-201ENST00000370818 FZD10Q9ULW2 581 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 A0A0U1RQF3 1178 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 NRP1O14786 923 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 BRAFP15056 766 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 SULT1E1P49888 294 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 RNASELQ05823 741 aaKnown RBP13.24□□□□□ -0.29
GPC3-201ENST00000370818 PARP6Q2NL67 630 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 SYCP2LQ5T4T6 812 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 DSTYKQ6XUX3 929 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 GPRIN1Q7Z2K8 1008 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 FAM35AQ86V20 835 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 SRRM1Q8IYB3 904 aaKnown RBP13.24□□□□□ -0.29
GPC3-201ENST00000370818 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.24□□□□□ -0.297e-6■■■■□ 20.7
GPC3-201ENST00000370818 FBXO36Q8NEA4 188 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 PYROXD1Q8WU10 500 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 UCMAQ8WVF2 138 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 DNAJC9Q8WXX5 260 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 DTNBP1Q96EV8 351 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 RMDN2Q96LZ7 410 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms