RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 P3H1Q32P28 736 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 TMEM240Q5SV17 173 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 FAM72AQ5TYM5 149 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 IZUMO3Q5VZ72 239 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 FAM72DQ6L9T8 149 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 DARS2Q6PI48 645 aaKnown RBP16.94■□□□□ 0.3
TPM1-201ENST00000267996 RFX8Q6ZV50 586 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 FAM72BQ86X60 149 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 ZNF461Q8TAF7 563 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 FBXO32Q969P5 355 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 OLFM3Q96PB7 478 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 AAASQ9NRG9 546 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 DTLQ9NZJ0 730 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 PRKAG2Q9UGJ0 569 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 HEY1Q9Y5J3 304 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 KIAA1671Q9BY89 1806 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 SLC38A8A6NNN8 435 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 H7C0C1 242 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 EEF2KO00418 725 aaKnown RBP16.94■□□□□ 0.3
TPM1-201ENST00000267996 NDC80O14777 642 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 RRP9O43818 475 aaKnown RBP16.94■□□□□ 0.3
TPM1-201ENST00000267996 IFNB1P01574 187 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 RPL22P35268 128 aaKnown RBP16.94■□□□□ 0.3
TPM1-201ENST00000267996 ATP5OP48047 213 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 TAF10Q12962 218 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 GPS1Q13098 491 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 GPS2Q13227 327 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 RAB33AQ14088 237 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 CFAP58Q5T655 872 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 ZC3H18Q86VM9 953 aaKnown RBP16.94■□□□□ 0.3
TPM1-201ENST00000267996 FAM71DQ8N9W8 422 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 HAPLN3Q96S86 360 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 FOXP3Q9BZS1 431 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 TSPYL1Q9H0U9 437 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.94■□□□□ 0.33e-7■■■□□ 15.3
TPM1-201ENST00000267996 STK39Q9UEW8 545 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.93■□□□□ 0.3
TPM1-201ENST00000267996 KCNU1A8MYU2 1149 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 C2CD2LO14523 706 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 CREB3O43889 395 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 LILRB3O75022 631 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 SEC24AO95486 1093 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 URODP06132 367 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 CCR1P32246 355 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 SLMAPQ14BN4 828 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 BZW1Q7L1Q6 419 aaKnown RBP16.93■□□□□ 0.3
TPM1-201ENST00000267996 CLP1Q92989 425 aaKnown RBP16.93■□□□□ 0.3
TPM1-201ENST00000267996 SLC39A13Q96H72 371 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 SERPINB11Q96P15 392 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 ZIM3Q96PE6 472 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 EPB41L4BQ9H329 900 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 MED4Q9NPJ6 270 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 TLR8Q9NR97 1041 aaKnown RBP16.93■□□□□ 0.3
TPM1-201ENST00000267996 SFMBT1Q9UHJ3 866 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 TPX2Q9ULW0 747 aaKnown RBP16.93■□□□□ 0.3
TPM1-201ENST00000267996 MFHAS1Q9Y4C4 1052 aa16.93■□□□□ 0.3
TPM1-201ENST00000267996 ZBBXA8MT70 800 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 H0YGN5 161 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 H3BQF6 201 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 SYF2O95926 243 aaKnown RBP16.92■□□□□ 0.3
TPM1-201ENST00000267996 RARGP13631 454 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 GGCXP38435 758 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 MORF4L2Q15014 288 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 SLC45A4Q5BKX6 768 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 ARTNQ5T4W7 220 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 RNASEH2BQ5TBB1 312 aaKnown RBP16.92■□□□□ 0.3
TPM1-201ENST00000267996 RASIP1Q5U651 963 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 PSRC1Q6PGN9 363 aaPredicted RBP16.92■□□□□ 0.3
TPM1-201ENST00000267996 CDKL3Q8IVW4 592 aaPredicted RBP16.92■□□□□ 0.3
TPM1-201ENST00000267996 VPS52Q8N1B4 723 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 ZNF276Q8N554 614 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 QKIQ96PU8 341 aaKnown RBP eCLIP16.92■□□□□ 0.31e-8■■■■■ 42
TPM1-201ENST00000267996 EPAS1Q99814 870 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 SH3GL2Q99962 352 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 OLA1Q9NTK5 396 aaKnown RBP16.92■□□□□ 0.3
TPM1-201ENST00000267996 CXXC1Q9P0U4 656 aaPredicted RBP16.92■□□□□ 0.3
TPM1-201ENST00000267996 FNIP2Q9P278 1114 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 OR12D3Q9UGF7 316 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 TLR6Q9Y2C9 796 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 ATP8A1Q9Y2Q0 1164 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 FARP1Q9Y4F1 1045 aaPredicted RBP16.92■□□□□ 0.3
TPM1-201ENST00000267996 PCDHB12Q9Y5F1 795 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 NFS1Q9Y697 457 aa16.92■□□□□ 0.3
TPM1-201ENST00000267996 HACD1B0YJ81 288 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 MSI1O43347 362 aaKnown RBP16.91■□□□□ 0.3
TPM1-201ENST00000267996 ERCC2P18074 760 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 RBL1P28749 1068 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 PMS2P54278 862 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 TPI1P60174 286 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 MANEALQ5VSG8 457 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 LRIG3Q6UXM1 1119 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 PCGF5Q86SE9 256 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 FIBCD1Q8N539 461 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
TPM1-201ENST00000267996 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
TPM1-201ENST00000267996 GIPC2Q8TF65 315 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 HERVK_113Q902F9 699 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 RNF34Q969K3 372 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 UBE2OQ9C0C9 1292 aaKnown RBP16.91■□□□□ 0.3
TPM1-201ENST00000267996 PABPC3Q9H361 631 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms