RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ITGAVP06756 1048 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 CPB1P15086 417 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 IL4RP24394 825 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 ECHS1P30084 290 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 VCPP55072 806 aaKnown RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 ARPP19P56211 112 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 DYNLT1P63172 113 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 DEFB103AP81534 67 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 OTUD4Q01804 1114 aaKnown RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 KRT17Q04695 432 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 NME3Q13232 169 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 PTK6Q13882 451 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 CA9Q16790 459 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 ANKRD20A8PQ5CZ79 823 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 SPOUT1Q5T280 376 aaKnown RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 OTUD1Q5VV17 481 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 PTCRAQ6ISU1 281 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 KCNT2Q6UVM3 1135 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 ZNF365Q70YC5 407 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 TAS1R1Q7RTX1 841 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 RNF168Q8IYW5 571 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 NUP93Q8N1F7 819 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 CCDC185Q8N715 623 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 ATAD1Q8NBU5 361 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 SCAMP5Q8TAC9 235 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 SLC35B2Q8TB61 432 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 SLC7A14Q8TBB6 771 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 SPPL2BQ8TCT7 592 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 CCHCR1Q8TD31 782 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 NKD2Q969F2 451 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 FAF2Q96CS3 445 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 GDAP1L1Q96MZ0 367 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 FAM118BQ9BPY3 351 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 FBXO44Q9H4M3 255 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 DHX35Q9H5Z1 703 aaKnown RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 VIPAS39Q9H9C1 493 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 RC3H2Q9HBD1 1191 aaKnown RBP9.26□□□□□ -0.93
CCDC47-207ENST00000612558 IL23AQ9NPF7 189 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 ABCC13Q9NSE7 274 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 GPATCH2LQ9NWQ4 482 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 DNPEPQ9ULA0 475 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 FZD10Q9ULW2 581 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 AP4E1Q9UPM8 1137 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 ZNF148Q9UQR1 794 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 PATJQ8NI35 1801 aa9.26□□□□□ -0.93
CCDC47-207ENST00000612558 SYNJ2BP-COX16A0A087WUM0 186 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 APOL1O14791 398 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 FAM153BP0C7A2 387 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 ACRP10323 421 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 ZFXP17010 805 aaPredicted RBP9.25□□□□□ -0.93
CCDC47-207ENST00000612558 TGM2P21980 687 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 ADRA1BP35368 520 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 RPL21P46778 160 aaKnown RBP9.25□□□□□ -0.93
CCDC47-207ENST00000612558 YWHAGP61981 247 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC47-207ENST00000612558 PITX1P78337 314 aaPredicted RBP9.25□□□□□ -0.93
CCDC47-207ENST00000612558 CALCOCO2Q13137 446 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 BTG3Q14201 252 aaPredicted RBP9.25□□□□□ -0.93
CCDC47-207ENST00000612558 OASLQ15646 514 aaKnown RBP9.25□□□□□ -0.93
CCDC47-207ENST00000612558 DDR2Q16832 855 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 FAM153CQ494X1 144 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 PPP6R3Q5H9R7 873 aaPredicted RBP9.25□□□□□ -0.93
CCDC47-207ENST00000612558 BTBD8Q5XKL5 378 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 KIAA1841Q6NSI8 718 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 FAM117BQ6P1L5 589 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 RSPO2Q6UXX9 243 aaPredicted RBP9.25□□□□□ -0.93
CCDC47-207ENST00000612558 GSTA5Q7RTV2 222 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 UBE2Q1Q7Z7E8 422 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 FAM131BQ86XD5 332 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 ALLCQ8N6M5 410 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 CCDC89Q8N998 374 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 PCDH19Q8TAB3 1148 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 ACTL9Q8TC94 416 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 PIK3R5Q8WYR1 880 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 EDEM1Q92611 657 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 P3H4Q92791 437 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 NTAN1Q96AB6 310 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 HAUS1Q96CS2 278 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 ZNF558Q96NG5 402 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 PGLYRP2Q96PD5 576 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 ACBD3Q9H3P7 528 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 PRDM16Q9HAZ2 1276 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 PIGVQ9NUD9 493 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 TMEM51Q9NW97 253 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 MTMR10Q9NXD2 777 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 FAM53CQ9NYF3 392 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 IL37Q9NZH6 218 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 GRHL1Q9NZI5 618 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 COX16Q9P0S2 106 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 WHRNQ9P202 907 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 RCOR3Q9P2K3 495 aaPredicted RBP9.25□□□□□ -0.93
CCDC47-207ENST00000612558 MTRRQ9UBK8 725 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 PRKAG2Q9UGJ0 569 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 ASIC3Q9UHC3 531 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 FAM153AQ9UHL3 310 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 FBXW11Q9UKB1 542 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 SCML2Q9UQR0 700 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 NEU2Q9Y3R4 380 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 BACE2Q9Y5Z0 518 aa9.25□□□□□ -0.93
CCDC47-207ENST00000612558 MTMR11A4FU01 709 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms