RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 GOLGA1Q92805 767 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 FAM149B1Q96BN6 582 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 NAT10Q9H0A0 1025 aaKnown RBP23.31■■□□□ 1.32
MBD3-208ENST00000590830 STOML2Q9UJZ1 356 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 SART1O43290 800 aaKnown RBP23.3■■□□□ 1.32
MBD3-208ENST00000590830 ERBB2P04626 1255 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 HNRNPLP14866 589 aaKnown RBP eCLIP23.3■■□□□ 1.32
MBD3-208ENST00000590830 TIE1P35590 1138 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 HARS2P49590 506 aaKnown RBP23.3■■□□□ 1.32
MBD3-208ENST00000590830 JAM2P57087 298 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 MRPS21P82921 87 aaKnown RBP23.3■■□□□ 1.32
MBD3-208ENST00000590830 PTPN20Q4JDL3 420 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 GRAMD4Q6IC98 578 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 LONP2Q86WA8 852 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 ALLCQ8N6M5 410 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 TERB1Q8NA31 727 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 IL17RCQ8NAC3 791 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 ADAM32Q8TC27 787 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 XPO6Q96QU8 1125 aaKnown RBP23.3■■□□□ 1.32
MBD3-208ENST00000590830 HHIPQ96QV1 700 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 NLRC4Q9NPP4 1024 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 CLEC4EQ9ULY5 219 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 GPR179Q6PRD1 2367 aa23.3■■□□□ 1.32
MBD3-208ENST00000590830 TBX4P57082 545 aa23.29■■□□□ 1.32
MBD3-208ENST00000590830 YWHAZP63104 245 aaKnown RBP23.29■■□□□ 1.32
MBD3-208ENST00000590830 PITX1P78337 314 aaPredicted RBP23.29■■□□□ 1.32
MBD3-208ENST00000590830 UBXN1Q04323 297 aa23.29■■□□□ 1.32
MBD3-208ENST00000590830 TAF3Q5VWG9 929 aa23.29■■□□□ 1.32
MBD3-208ENST00000590830 WDR5BQ86VZ2 330 aa23.29■■□□□ 1.32
MBD3-208ENST00000590830 ANKRD20A12PQ8NF67 263 aa23.29■■□□□ 1.32
MBD3-208ENST00000590830 CCDC26Q8TAB7 109 aa23.29■■□□□ 1.32
MBD3-208ENST00000590830 FCRL2Q96LA5 508 aaPredicted RBP23.29■■□□□ 1.32
MBD3-208ENST00000590830 EPC1Q9H2F5 836 aa23.29■■□□□ 1.32
MBD3-208ENST00000590830 MMP17Q9ULZ9 603 aa23.29■■□□□ 1.32
MBD3-208ENST00000590830 GOLGA6L7A0A1B0GV03 622 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 FAM170AA1A519 330 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 SYCE3A1L190 88 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 PRRT4C9JH25 899 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 SGK1O00141 431 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 TSPAN3O60637 253 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 ADAM23O75077 832 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 GFPT2O94808 682 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 KLF8O95600 359 aaPredicted RBP23.28■■□□□ 1.32
MBD3-208ENST00000590830 CDH5P33151 784 aaPredicted RBP23.28■■□□□ 1.32
MBD3-208ENST00000590830 ZNF165P49910 485 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 IQCB1Q15051 598 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 C10orf76Q5T2E6 689 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 ADGRF1Q5T601 910 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 TMEM92Q6UXU6 159 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 FAM183BPQ6ZVS7 135 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 TAC4Q86UU9 113 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 CAMKK1Q8N5S9 505 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 EPS8L1Q8TE68 723 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 ACDQ96AP0 544 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 SLC39A13Q96H72 371 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 ERGIC2Q96RQ1 377 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 POPDC2Q9HBU9 364 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 STARD13Q9Y3M8 1113 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 RIF1Q5UIP0 2472 aaKnown RBP23.28■■□□□ 1.32
MBD3-208ENST00000590830 WDR87Q6ZQQ6 2873 aa23.28■■□□□ 1.32
MBD3-208ENST00000590830 TEX33O43247 280 aa23.27■■□□□ 1.32
MBD3-208ENST00000590830 IGLV3-25P01717 112 aa23.27■■□□□ 1.32
MBD3-208ENST00000590830 MMEP08473 750 aa23.27■■□□□ 1.32
MBD3-208ENST00000590830 CHRNB2P17787 502 aa23.27■■□□□ 1.32
MBD3-208ENST00000590830 DGKGP49619 791 aa23.27■■□□□ 1.32
MBD3-208ENST00000590830 RING1Q06587 406 aa23.27■■□□□ 1.32
MBD3-208ENST00000590830 EIF4EBP2Q13542 120 aaPredicted RBP23.27■■□□□ 1.32
MBD3-208ENST00000590830 OLFML1Q6UWY5 402 aa23.27■■□□□ 1.32
MBD3-208ENST00000590830 TXNDC5Q8NBS9 432 aaKnown RBP23.27■■□□□ 1.32
MBD3-208ENST00000590830 SLC20A1Q8WUM9 679 aa23.27■■□□□ 1.32
MBD3-208ENST00000590830 SLC2A13Q96QE2 648 aa23.27■■□□□ 1.32
MBD3-208ENST00000590830 NOCTQ9UK39 431 aaKnown RBP23.27■■□□□ 1.32
MBD3-208ENST00000590830 KIAA1549LQ6ZVL6 1849 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 SMTNL1A8MU46 457 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 CAPN9O14815 690 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 GRAP2O75791 330 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 LATS1O95835 1130 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 SOX5P35711 763 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 SGSHP51688 502 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 PREPLQ4J6C6 727 aaPredicted RBP23.26■■□□□ 1.31
MBD3-208ENST00000590830 FAM133BQ5BKY9 247 aaKnown RBP23.26■■□□□ 1.31
MBD3-208ENST00000590830 NADSYN1Q6IA69 706 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 OR6B2Q6IFH4 312 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 DEFB106AQ8N104 65 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 TMEM35BQ8NCS4 154 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 DDI1Q8WTU0 396 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 AZIN2Q96A70 460 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 MYEOVQ96EZ4 313 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 NOX5Q96PH1 765 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 TLR6Q9Y2C9 796 aa23.26■■□□□ 1.31
MBD3-208ENST00000590830 CCDC163A0A0D9SF12 145 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 ACSL4O60488 711 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 GLI1P08151 1106 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 SLC6A4P31645 630 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 CRY1Q16526 586 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 GEN1Q17RS7 908 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 DCAF6Q58WW2 860 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 EFHC1Q5JVL4 640 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 EGFLAMQ63HQ2 1017 aa23.25■■□□□ 1.31
MBD3-208ENST00000590830 NUGGCQ68CJ6 796 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms