RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 LCLAT1Q6UWP7 414 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 ANKS1BQ7Z6G8 1248 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 TRIM59Q8IWR1 403 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 TMEFF1Q8IYR6 380 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 TRIML1Q8N9V2 468 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 EHBP1Q8NDI1 1231 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 UCMAQ8WVF2 138 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 TFAP2BQ92481 460 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 DDX1Q92499 740 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 ACOX2Q99424 681 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 INTS2Q9H0H0 1204 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 ST7Q9NRC1 585 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 RXFP3Q9NSD7 469 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 ABCC13Q9NSE7 274 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 CALCOCO1Q9P1Z2 691 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 SFMBT1Q9UHJ3 866 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 STARD13Q9Y3M8 1113 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 RAD54BQ9Y620 910 aa10.09□□□□□ -0.79
NPLOC4-212ENST00000573328 TP53BP1Q12888 1972 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 KHNYNO15037 678 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 AP5Z1O43299 807 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 MSI1O43347 362 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 TSPAN3O60637 253 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 PENKP01210 267 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 LTFP02788 710 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 NDUFV2P19404 249 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 LIMK1P53667 647 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 MFAP3P55082 362 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 CNGA2Q16280 664 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 FYB2Q5VWT5 728 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 LYSMD4Q5XG99 296 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 PMF1Q6P1K2 205 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 KIAA1324Q6UXG2 1013 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 BHLHA9Q7RTU4 235 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 CPXM2Q8N436 756 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 FRMD1Q8N878 549 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 OLIG1Q8TAK6 271 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 IPO4Q8TEX9 1081 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 KCTD13Q8WZ19 329 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 FAM149B1Q96BN6 582 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 CIPCQ9C0C6 399 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 MIS12Q9H081 205 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 CHMP5Q9NZZ3 219 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 CYP8B1Q9UNU6 501 aa10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 HBS1LQ9Y450 684 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 MUC22E2RYF6 1773 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-212ENST00000573328 NCOR2Q9Y618 2525 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 PATE3B3GLJ2 98 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 WASH3PC4AMC7 463 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 RNF225M0QZC1 329 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 MED7O43513 233 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 SYNCRIPO60506 623 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 NDUFS2O75306 463 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 ZNF217O75362 1048 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 CISD3P0C7P0 127 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 USP8P40818 1118 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 MTIF2P46199 727 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 MARSP56192 900 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 E2F5Q15329 346 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 TRIP4Q15650 581 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 GEN1Q17RS7 908 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 PKDCCQ504Y2 493 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 MPPE1Q53F39 396 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 KIAA1211LQ6NV74 962 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 SLC36A4Q6YBV0 504 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 DEFB119Q8N690 84 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 LMO3Q8TAP4 145 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 CLEC4CQ8WTT0 213 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 IRGQQ8WZA9 623 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 HSFY1Q96LI6 401 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 GABRG3Q99928 467 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 CRACR2AQ9BSW2 395 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 NUSAP1Q9BXS6 441 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 UBE2TQ9NPD8 197 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 MBD1Q9UIS9 605 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 RWDD2AQ9UIY3 292 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 HCN2Q9UL51 889 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 SLC27A6Q9Y2P4 619 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 STON1Q9Y6Q2 735 aa10.07□□□□□ -0.8
NPLOC4-212ENST00000573328 A0A1W2PQF6 199 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 LNP1A1A4G5 178 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 TYW5A2RUC4 315 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 C4orf47A7E2U8 309 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 GFRA2O00451 464 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 CAPN9O14815 690 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 THAP12O43422 761 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 FBXO21O94952 628 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 LETM1O95202 739 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 CFIP05156 583 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 NCAM1P13591 858 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 GNA15P30679 374 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 DPP6P42658 865 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 IL12RB1P42701 662 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 PTGER3P43115 390 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 ZNF132P52740 706 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms