RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 DCLK3Q9C098 648 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 PDCL3Q9H2J4 239 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 DEC1Q9P2X7 70 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 CLEC4EQ9ULY5 219 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 SLC8A2Q9UPR5 921 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 HBS1LQ9Y450 684 aaKnown RBP10.82□□□□□ -0.68
SNX6-208ENST00000556712 MUC22E2RYF6 1773 aaPredicted RBP10.82□□□□□ -0.68
SNX6-208ENST00000556712 SYNJ2BP-COX16A0A087WUM0 186 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 GOLGA6L7A0A1B0GV03 622 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 TBC1D3BA6NDS4 549 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 SGK1O00141 431 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 CAPN9O14815 690 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 TEX33O43247 280 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 SART1O43290 800 aaKnown RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 ATG13O75143 517 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 KLF8O95600 359 aaPredicted RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 PENKP01210 267 aaPredicted RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 LMNAP02545 664 aaKnown RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 MMEP08473 750 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 HNRNPLP14866 589 aaKnown RBP eCLIP10.81□□□□□ -0.686e-14■□□□□ 8.8
SNX6-208ENST00000556712 CHKAP35790 457 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 KIR2DL1P43626 348 aaPredicted RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 HARS2P49590 506 aaKnown RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 DGKGP49619 791 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 ZNF165P49910 485 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 NRLP54845 237 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 TBX4P57082 545 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 JAM2P57087 298 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 UBXN1Q04323 297 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 C2CD6Q53TS8 623 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 EGFLAMQ63HQ2 1017 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 OR6B2Q6IFH4 312 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 PRR23BQ6ZRT6 265 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 SYT13Q7L8C5 426 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 LONP2Q86WA8 852 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 FAM217AQ8IXS0 508 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 IL17RCQ8NAC3 791 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 TXNDC5Q8NBS9 432 aaKnown RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 DDX1Q92499 740 aaKnown RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 FCRL2Q96LA5 508 aaPredicted RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 XPO6Q96QU8 1125 aaKnown RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 BPIFA3Q9BQP9 254 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 NAT10Q9H0A0 1025 aaKnown RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 LHX5Q9H2C1 402 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 COX16Q9P0S2 106 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 WDR35Q9P2L0 1181 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 HCN2Q9UL51 889 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 SMG5Q9UPR3 1016 aaKnown RBP10.81□□□□□ -0.68
SNX6-208ENST00000556712 ZNF510Q9Y2H8 683 aa10.81□□□□□ -0.68
SNX6-208ENST00000556712 MYO18AQ92614 2054 aaKnown RBP10.8□□□□□ -0.68
SNX6-208ENST00000556712 PRRT4C9JH25 899 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 IRAK2O43187 625 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 MOCS2O96007 188 aaPredicted RBP10.8□□□□□ -0.68
SNX6-208ENST00000556712 CISD3P0C7P0 127 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 SLC6A4P31645 630 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 SOX5P35711 763 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 WASP42768 502 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 IQCB1Q15051 598 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 GEN1Q17RS7 908 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 DCAF6Q58WW2 860 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 FAM133BQ5BKY9 247 aaKnown RBP10.8□□□□□ -0.68
SNX6-208ENST00000556712 NADSYN1Q6IA69 706 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 RFWD3Q6PCD5 774 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 OLFML1Q6UWY5 402 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 TMEM92Q6UXU6 159 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 WDR5BQ86VZ2 330 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 CPXM2Q8N436 756 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 ZNF513Q8N8E2 541 aaPredicted RBP10.8□□□□□ -0.68
SNX6-208ENST00000556712 SUMF1Q8NBK3 374 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 TSTD1Q8NFU3 115 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 NEK11Q8NG66 645 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 IPO4Q8TEX9 1081 aaKnown RBP10.8□□□□□ -0.68
SNX6-208ENST00000556712 DDI1Q8WTU0 396 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 MYEOVQ96EZ4 313 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 PRICKLE1Q96MT3 831 aaPredicted RBP10.8□□□□□ -0.68
SNX6-208ENST00000556712 SERPINB11Q96P15 392 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 NOX5Q96PH1 765 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 SPAG5Q96R06 1193 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 ACOX2Q99424 681 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 HINFPQ9BQA5 517 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 FAM126AQ9BYI3 521 aaPredicted RBP10.8□□□□□ -0.68
SNX6-208ENST00000556712 TPSD1Q9BZJ3 242 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 EPC1Q9H2F5 836 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 SYNCQ9H7C4 482 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 POPDC2Q9HBU9 364 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 XPO7Q9UIA9 1087 aaKnown RBP10.8□□□□□ -0.68
SNX6-208ENST00000556712 NOCTQ9UK39 431 aaKnown RBP10.8□□□□□ -0.68
SNX6-208ENST00000556712 MMP17Q9ULZ9 603 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 CEP83Q9Y592 693 aa10.8□□□□□ -0.68
SNX6-208ENST00000556712 GFRA2O00451 464 aa10.79□□□□□ -0.68
SNX6-208ENST00000556712 HRO43593 1189 aa10.79□□□□□ -0.68
SNX6-208ENST00000556712 ADAM23O75077 832 aa10.79□□□□□ -0.68
SNX6-208ENST00000556712 DAB1O75553 588 aa10.79□□□□□ -0.68
SNX6-208ENST00000556712 APBB3O95704 486 aa10.79□□□□□ -0.68
SNX6-208ENST00000556712 TRUB2O95900 331 aaKnown RBP10.79□□□□□ -0.68
SNX6-208ENST00000556712 CHRNB2P17787 502 aa10.79□□□□□ -0.68
SNX6-208ENST00000556712 HOXD9P28356 352 aaPredicted RBP10.79□□□□□ -0.68
SNX6-208ENST00000556712 CDH5P33151 784 aaPredicted RBP10.79□□□□□ -0.68
SNX6-208ENST00000556712 TNFRSF4P43489 277 aa10.79□□□□□ -0.68
SNX6-208ENST00000556712 DGKEP52429 567 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms