RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 CCDC14Q49A88 953 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 SLC13A5Q86YT5 568 aaPredicted RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 IFT20Q8IY31 132 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 FCRL2Q96LA5 508 aaPredicted RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 KLHL5Q96PQ7 755 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 C11orf84Q9BUA3 381 aaPredicted RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 FBXO44Q9H4M3 255 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 MYH15Q9Y2K3 1946 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 OR6C75A6NL08 312 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 SLC38A8A6NNN8 435 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 TGM5O43548 720 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 CAND2O75155 1236 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 PARNO95453 639 aaKnown RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 SEC24AO95486 1093 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 KRT14P02533 472 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 KCNA5P22460 613 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 BMPR1AP36894 532 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 RPS24P62847 133 aaKnown RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 ASTE1Q2TB18 679 aaPredicted RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 MEI1Q5TIA1 1274 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 RNF219Q5W0B1 726 aaPredicted RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 TTC19Q6DKK2 380 aaPredicted RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 ALKAL1Q6UXT8 129 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 SPOCD1Q6ZMY3 1216 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 MYRIPQ8NFW9 859 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 C9orf72Q96LT7 481 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 CFHR5Q9BXR6 569 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 MTRF1LQ9UGC7 380 aaKnown RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 VPS28Q9UK41 221 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 LSM7Q9UK45 103 aaKnown RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 DNPEPQ9ULA0 475 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 CPQQ9Y646 472 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 SCN1AP35498 2009 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 PIRTP0C851 137 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 TPH1P17752 444 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 ARL1P40616 181 aaPredicted RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 ERMARDQ5T6L9 678 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 PALM2Q8IXS6 379 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 ANKLE1Q8NAG6 615 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 IPMKQ8NFU5 416 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 ZNF461Q8TAF7 563 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 SLC35F5Q8WV83 523 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 RPL10LQ96L21 214 aaKnown RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 TGS1Q96RS0 853 aaKnown RBP8.47□□□□□ -1.05
CHPT1-208ENST00000552215 PIGVQ9NUD9 493 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 MARCH5Q9NX47 278 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 GDAP2Q9NXN4 497 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 FAM169AQ9Y6X4 670 aa8.47□□□□□ -1.05
CHPT1-208ENST00000552215 PAGE1O75459 146 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 SOD2P04179 222 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 CARSP49589 748 aaKnown RBP8.46□□□□□ -1.05
CHPT1-208ENST00000552215 DAOAP59103 153 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 TMPRSS15P98073 1019 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 TFDP2Q14188 446 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 FOXR2Q6PJQ5 311 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 PHF13Q86YI8 300 aaPredicted RBP8.46□□□□□ -1.05
CHPT1-208ENST00000552215 PGBD3Q8N328 593 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 ATP11CQ8NB49 1132 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 SPPL2BQ8TCT7 592 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 MGARPQ8TDB4 240 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 CLSTN3Q9BQT9 956 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 CRISPLD2Q9H0B8 497 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 ABCB6Q9NP58 842 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 KCNK9Q9NPC2 374 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 PRDM10Q9NQV6 1147 aa8.46□□□□□ -1.05
CHPT1-208ENST00000552215 F5H5T6 163 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 INPPL1O15357 1258 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 EFCAB14O75071 495 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 CYP1A1P04798 512 aaPredicted RBP8.46□□□□□ -1.06
CHPT1-208ENST00000552215 NOS2P35228 1153 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 MATKP42679 507 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 VSNL1P62760 191 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 GBE1Q04446 702 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 BYSLQ13895 437 aaKnown RBP8.46□□□□□ -1.06
CHPT1-208ENST00000552215 P3H1Q32P28 736 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 RCOR2Q8IZ40 523 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 CRYBG2Q8N1P7 616 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 TIFAQ96CG3 184 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 RMDN1Q96DB5 314 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 HSFY1Q96LI6 401 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 ABCF3Q9NUQ8 709 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 LINC01553A4QN01 128 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 NEMP1O14524 444 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 SYN3O14994 580 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 TRIM66O15016 1216 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 CYP1A2P05177 515 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 VIPR2P41587 438 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 SLC11A2P49281 568 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 ZNF143P52747 638 aaPredicted RBP8.46□□□□□ -1.06
CHPT1-208ENST00000552215 BOLA3Q53S33 107 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 CES3Q6UWW8 571 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 Q7L0L9 218 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 TP53INP2Q8IXH6 220 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 TCEAL4Q96EI5 215 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 TMA16Q96EY4 203 aaKnown RBP8.46□□□□□ -1.06
CHPT1-208ENST00000552215 PBX4Q9BYU1 374 aa8.46□□□□□ -1.06
CHPT1-208ENST00000552215 CWC15Q9P013 229 aaKnown RBP8.46□□□□□ -1.06
CHPT1-208ENST00000552215 CSH1P0DML2 217 aa8.45□□□□□ -1.06
CHPT1-208ENST00000552215 CSH2P0DML3 217 aa8.45□□□□□ -1.06
CHPT1-208ENST00000552215 XPAP23025 273 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms