RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ARHGAP6O43182 974 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 F9P00740 461 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 IGLV3-25P01717 112 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 APOEP02649 317 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 TFE3P19532 575 aaPredicted RBP15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 PSMA2P25787 234 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 IFNAR2P48551 515 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 ZNF143P52747 638 aaPredicted RBP15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 KRT83P78385 493 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 RING1Q06587 406 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 CCDC173Q0VFZ6 552 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 ARHGAP29Q52LW3 1261 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 NUGGCQ68CJ6 796 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 DENND1CQ8IV53 801 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 UNC45BQ8IWX7 931 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 ACRBPQ8NEB7 543 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 ZNF564Q8TBZ8 553 aaPredicted RBP15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 NT5C3BQ969T7 300 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 ZFYVE19Q96K21 471 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 DESI2Q9BSY9 194 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 BRD9Q9H8M2 597 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 TBC1D14Q9P2M4 693 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 ANAPC7Q9UJX3 599 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 WNT6Q9Y6F9 365 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 CCP110O43303 1012 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 IGLV3-27P01718 113 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 SLC2A3P11169 496 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 RDXP35241 583 aaKnown RBP15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 PTPN9P43378 593 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 ZC3H12AQ5D1E8 599 aaKnown RBP15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 OTUD1Q5VV17 481 aaPredicted RBP15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 HTR3DQ70Z44 454 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 KIAA1328Q86T90 577 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 BBS7Q8IWZ6 715 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 FAM172AQ8WUF8 416 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 OSCP1Q8WVF1 389 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 PGAP3Q96FM1 320 aaPredicted RBP15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 FCRL2Q96LA5 508 aaPredicted RBP15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 CNPY3Q9BT09 278 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 ADAM33Q9BZ11 813 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 TRIM7Q9C029 511 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 WDCPQ9H6R7 721 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 CD320Q9NPF0 282 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 CALCOCO1Q9P1Z2 691 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 UVRAGQ9P2Y5 699 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 SORCS3Q9UPU3 1222 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 ZNF510Q9Y2H8 683 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 PAXBP1Q9Y5B6 917 aa15.06■□□□□ 0
TNFRSF1A-216ENST00000543995 UNC80Q8N2C7 3258 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 CHADO15335 359 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 MOCS2O96007 188 aaPredicted RBP15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 KLKB1P03952 638 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 CCR1P32246 355 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 ATXN1P54253 815 aaKnown RBP15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 CCZ1BP86790 482 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 CCZ1P86791 482 aaPredicted RBP15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 OGDHQ02218 1023 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 SH3PXD2AQ5TCZ1 1133 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 TRIM68Q6AZZ1 485 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 STRADAQ7RTN6 431 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 RHOT2Q8IXI1 618 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 TXLNBQ8N3L3 684 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 ATP6V0D2Q8N8Y2 350 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 SLC35G2Q8TBE7 412 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 FNIP1Q8TF40 1166 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 RFFLQ8WZ73 363 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 IRF7Q92985 503 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 SLC39A13Q96H72 371 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 LINC00597Q9H2U6 94 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 EBF3Q9H4W6 596 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 OSGEPQ9NPF4 335 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 PIGVQ9NUD9 493 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 SLC12A6Q9UHW9 1150 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 AGO1Q9UL18 857 aaKnown RBP15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 TFR2Q9UP52 801 aa15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 KIF26AQ9ULI4 1882 aaPredicted RBP15.05■□□□□ -0
TNFRSF1A-216ENST00000543995 MYO1FO00160 1098 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 NARSO43776 548 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 GREM1O60565 184 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 RNF8O76064 485 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 SLC11A2P49281 568 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 VAV2P52735 878 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 EIF4EBP2Q13542 120 aaPredicted RBP15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 PDGFRLQ15198 375 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 Q6ZNB5 142 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 FAM131BQ86XD5 332 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 KIAA1958Q8N8K9 716 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 ATP2A3Q93084 1043 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 OTUB2Q96DC9 234 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 ASIC4Q96FT7 647 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 BTBD6Q96KE9 485 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 TKTL2Q9H0I9 626 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 TMEM51Q9NW97 253 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 IP6K2Q9UHH9 426 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 MUTYHQ9UIF7 546 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 DUSP12Q9UNI6 340 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 REXO2Q9Y3B8 237 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 TICRRQ7Z2Z1 1910 aa15.04■□□□□ -0
TNFRSF1A-216ENST00000543995 ENDOD1O94919 500 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms