RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 PENKP01210 267 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-212ENST00000540230 HNRNPLP14866 589 aaKnown RBP eCLIP15.71■□□□□ 0.11
UBE3B-212ENST00000540230 ZNF165P49910 485 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 JAM2P57087 298 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 UBXN1Q04323 297 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 DMC1Q14565 340 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 IQCB1Q15051 598 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 SMYD5Q6GMV2 418 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 FAM183BPQ6ZVS7 135 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 SYT13Q7L8C5 426 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 TAC4Q86UU9 113 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 CPXM2Q8N436 756 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 ALLCQ8N6M5 410 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 ATRIPQ8WXE1 791 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 GOLGA1Q92805 767 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 FAM126AQ9BYI3 521 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-212ENST00000540230 NAT10Q9H0A0 1025 aaKnown RBP15.71■□□□□ 0.11
UBE3B-212ENST00000540230 WDR35Q9P2L0 1181 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 RIF1Q5UIP0 2472 aaKnown RBP15.71■□□□□ 0.11
UBE3B-212ENST00000540230 WDR87Q6ZQQ6 2873 aa15.71■□□□□ 0.1
UBE3B-212ENST00000540230 TBC1D3BA6NDS4 549 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 PRRT4C9JH25 899 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 GFRA2O00451 464 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 TEX33O43247 280 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 SART1O43290 800 aaKnown RBP15.7■□□□□ 0.1
UBE3B-212ENST00000540230 TSPAN3O60637 253 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 GRAP2O75791 330 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 LMNAP02545 664 aaKnown RBP15.7■□□□□ 0.1
UBE3B-212ENST00000540230 MMEP08473 750 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 CISD3P0C7P0 127 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 CDH5P33151 784 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-212ENST00000540230 CHKAP35790 457 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 HARS2P49590 506 aaKnown RBP15.7■□□□□ 0.1
UBE3B-212ENST00000540230 SGSHP51688 502 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 BPIFB4P59827 614 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 C10orf76Q5T2E6 689 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 GRAMD4Q6IC98 578 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 OLFML1Q6UWY5 402 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 IL17RCQ8NAC3 791 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 ANKRD20A12PQ8NF67 263 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 SLC20A1Q8WUM9 679 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 FCRL2Q96LA5 508 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-212ENST00000540230 XPO6Q96QU8 1125 aaKnown RBP15.7■□□□□ 0.1
UBE3B-212ENST00000540230 ERGIC2Q96RQ1 377 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 FBXO10Q9UK96 956 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 SLC8A2Q9UPR5 921 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 FAM186AA6NE01 2351 aa15.7■□□□□ 0.1
UBE3B-212ENST00000540230 OTOGLQ3ZCN5 2332 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 GOLGA6L7A0A1B0GV03 622 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 SGK1O00141 431 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 HRO43593 1189 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 NRLP54845 237 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 TBX4P57082 545 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 MRPS21P82921 87 aaKnown RBP15.69■□□□□ 0.1
UBE3B-212ENST00000540230 C2CD6Q53TS8 623 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 OR6B2Q6IFH4 312 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 TMEM92Q6UXU6 159 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 LONP2Q86WA8 852 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 TXNDC5Q8NBS9 432 aaKnown RBP15.69■□□□□ 0.1
UBE3B-212ENST00000540230 ACDQ96AP0 544 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 MYEOVQ96EZ4 313 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 SLC39A13Q96H72 371 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 PCMTD1Q96MG8 357 aaPredicted RBP15.69■□□□□ 0.1
UBE3B-212ENST00000540230 EPC1Q9H2F5 836 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 POPDC2Q9HBU9 364 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 STOML2Q9UJZ1 356 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 NOCTQ9UK39 431 aaKnown RBP15.69■□□□□ 0.1
UBE3B-212ENST00000540230 MMP17Q9ULZ9 603 aa15.69■□□□□ 0.1
UBE3B-212ENST00000540230 CAPN9O14815 690 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 ADAM23O75077 832 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 KLF8O95600 359 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-212ENST00000540230 IGLV3-25P01717 112 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 HOXA6P31267 233 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 SLC6A4P31645 630 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 SOX5P35711 763 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 TNFRSF4P43489 277 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 DGKGP49619 791 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 YWHAZP63104 245 aaKnown RBP15.68■□□□□ 0.1
UBE3B-212ENST00000540230 GEN1Q17RS7 908 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 FAM133BQ5BKY9 247 aaKnown RBP15.68■□□□□ 0.1
UBE3B-212ENST00000540230 EGFLAMQ63HQ2 1017 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 NADSYN1Q6IA69 706 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 RFWD3Q6PCD5 774 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 BEND5Q7L4P6 421 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 WDR5BQ86VZ2 330 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 DEFB106AQ8N104 65 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 NEK11Q8NG66 645 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 SERPINB11Q96P15 392 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 SLC2A13Q96QE2 648 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 PDCL3Q9H2J4 239 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 SEMA4AQ9H3S1 761 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 XPO7Q9UIA9 1087 aaKnown RBP15.68■□□□□ 0.1
UBE3B-212ENST00000540230 SMTNL1A8MU46 457 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 IRAK2O43187 625 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 CHRNB2P17787 502 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 HOXD9P28356 352 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-212ENST00000540230 NOMO3P69849 1222 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 FMO1Q01740 532 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 RING1Q06587 406 aa15.68■□□□□ 0.1
UBE3B-212ENST00000540230 EIF4EBP2Q13542 120 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms