RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SLC8A2Q9UPR5 921 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 CEP83Q9Y592 693 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 IGLV3-27P01718 113 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 HOXA6P31267 233 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 FNTBP49356 437 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 JAM2P57087 298 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 PREPLQ4J6C6 727 aaPredicted RBP24.65■■□□□ 1.54
VARS-217ENST00000440048 GRAMD4Q6IC98 578 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 SYT13Q7L8C5 426 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 NOP9Q86U38 636 aaKnown RBP24.65■■□□□ 1.54
VARS-217ENST00000440048 DDX1Q92499 740 aaKnown RBP24.65■■□□□ 1.54
VARS-217ENST00000440048 ACDQ96AP0 544 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 PIWIL1Q96J94 861 aaKnown RBP24.65■■□□□ 1.54
VARS-217ENST00000440048 ERGIC2Q96RQ1 377 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 TRIM62Q9BVG3 475 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 PDCL3Q9H2J4 239 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 DAAM1Q9Y4D1 1078 aa24.65■■□□□ 1.54
VARS-217ENST00000440048 TBC1D3BA6NDS4 549 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 GFPT2O94808 682 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 PENKP01210 267 aaPredicted RBP24.64■■□□□ 1.54
VARS-217ENST00000440048 CHRM1P11229 460 aaPredicted RBP24.64■■□□□ 1.54
VARS-217ENST00000440048 TBX4P57082 545 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 YWHAZP63104 245 aaKnown RBP24.64■■□□□ 1.54
VARS-217ENST00000440048 MRPS21P82921 87 aaKnown RBP24.64■■□□□ 1.54
VARS-217ENST00000440048 TAF5Q15542 800 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 PTPN20Q4JDL3 420 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 EMC10Q5UCC4 262 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 TAF3Q5VWG9 929 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 FYB2Q5VWT5 728 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 SYPL2Q5VXT5 272 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 HEATR6Q6AI08 1181 aaKnown RBP24.64■■□□□ 1.54
VARS-217ENST00000440048 TERB1Q8NA31 727 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 NEK11Q8NG66 645 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 POPDC2Q9HBU9 364 aa24.64■■□□□ 1.54
VARS-217ENST00000440048 CAPN9O14815 690 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 LATS1O95835 1130 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 ERBB2P04626 1255 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 CDH5P33151 784 aaPredicted RBP24.63■■□□□ 1.53
VARS-217ENST00000440048 SOX5P35711 763 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 KIR2DL1P43626 348 aaPredicted RBP24.63■■□□□ 1.53
VARS-217ENST00000440048 RING1Q06587 406 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 DMC1Q14565 340 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 IQCB1Q15051 598 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 CCDC33Q8N5R6 958 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 TMEM35BQ8NCS4 154 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 EPS8L1Q8TE68 723 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 SERPINB11Q96P15 392 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 STOML2Q9UJZ1 356 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 FBXO10Q9UK96 956 aa24.63■■□□□ 1.53
VARS-217ENST00000440048 CYBBP04839 570 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 GLI1P08151 1106 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 CISD3P0C7P0 127 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 TIE1P35590 1138 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 SNX16P57768 344 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 NUGGCQ68CJ6 796 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 OR6B2Q6IFH4 312 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 TOGARAM2Q6ZUX3 1019 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 FAM183BPQ6ZVS7 135 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 TAC4Q86UU9 113 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 LONP2Q86WA8 852 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 UNC45BQ8IWX7 931 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 ADAM32Q8TC27 787 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 IPO4Q8TEX9 1081 aaKnown RBP24.62■■□□□ 1.53
VARS-217ENST00000440048 HHIPQ96QV1 700 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 SPAG5Q96R06 1193 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 SYNCQ9H7C4 482 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 ASNSD1Q9NWL6 643 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 MMP17Q9ULZ9 603 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 GPR179Q6PRD1 2367 aa24.62■■□□□ 1.53
VARS-217ENST00000440048 TEX33O43247 280 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 MMEP08473 750 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 STAT1P42224 750 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 PXNP49023 591 aaPredicted RBP24.61■■□□□ 1.53
VARS-217ENST00000440048 DGKGP49619 791 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 NNTQ13423 1086 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 EFHC1Q5JVL4 640 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 C10orf76Q5T2E6 689 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 ADGRF1Q5T601 910 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 OLFML1Q6UWY5 402 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 NUDT18Q6ZVK8 323 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 ALLCQ8N6M5 410 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 IL17RCQ8NAC3 791 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 SLC20A1Q8WUM9 679 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 FCRL2Q96LA5 508 aaPredicted RBP24.61■■□□□ 1.53
VARS-217ENST00000440048 SLC2A13Q96QE2 648 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 RTN4Q9NQC3 1192 aaKnown RBP24.61■■□□□ 1.53
VARS-217ENST00000440048 NOCTQ9UK39 431 aaKnown RBP24.61■■□□□ 1.53
VARS-217ENST00000440048 TLR6Q9Y2C9 796 aa24.61■■□□□ 1.53
VARS-217ENST00000440048 GFRA2O00451 464 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 TSPAN3O60637 253 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 HSF2BPO75031 334 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 KLF8O95600 359 aaPredicted RBP24.6■■□□□ 1.53
VARS-217ENST00000440048 WDR5BQ86VZ2 330 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 ZNF677Q86XU0 584 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 DEFB106AQ8N104 65 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 CAMKK1Q8N5S9 505 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 SUMF1Q8NBK3 374 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 TXNDC5Q8NBS9 432 aaKnown RBP24.6■■□□□ 1.53
VARS-217ENST00000440048 DDI1Q8WTU0 396 aa24.6■■□□□ 1.53
VARS-217ENST00000440048 SLC39A13Q96H72 371 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms