RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TFE3P19532 575 aaPredicted RBP14.21□□□□□ -0.13
VAPB-202ENST00000395802 RING1Q06587 406 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 EFEMP1Q12805 493 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 EIF4EBP2Q13542 120 aaPredicted RBP14.21□□□□□ -0.13
VAPB-202ENST00000395802 TFDP2Q14188 446 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 DUSP6Q16828 381 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 NUGGCQ68CJ6 796 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 SPOCD1Q6ZMY3 1216 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 UNC45BQ8IWX7 931 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 NOA1Q8NC60 698 aaKnown RBP14.21□□□□□ -0.13
VAPB-202ENST00000395802 SPATA4Q8NEY3 305 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.21□□□□□ -0.13
VAPB-202ENST00000395802 GDPD5Q8WTR4 605 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 CASP10Q92851 521 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 MS4A14Q96JA4 679 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 HAPLN3Q96S86 360 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 PEBP4Q96S96 227 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 SNRNP25Q9BV90 132 aaKnown RBP14.21□□□□□ -0.13
VAPB-202ENST00000395802 CALN1Q9BXU9 219 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 TKTL2Q9H0I9 626 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 DHX35Q9H5Z1 703 aaKnown RBP14.21□□□□□ -0.13
VAPB-202ENST00000395802 DZANK1Q9NVP4 752 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 LMCD1Q9NZU5 365 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 SFMBT1Q9UHJ3 866 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 HCFC2Q9Y5Z7 792 aa14.21□□□□□ -0.13
VAPB-202ENST00000395802 COL4A4P53420 1690 aaPredicted RBP14.21□□□□□ -0.13
VAPB-202ENST00000395802 ZNF638Q14966 1978 aaKnown RBP14.21□□□□□ -0.14
VAPB-202ENST00000395802 CLUHO75153 1309 aa14.21□□□□□ -0.14
VAPB-202ENST00000395802 ZFXP17010 805 aaPredicted RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 DDX6P26196 483 aaKnown RBP eCLIP14.2□□□□□ -0.149e-6■■■■□ 22.9
VAPB-202ENST00000395802 HTR7P34969 479 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 TBX4P57082 545 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 TRIP4Q15650 581 aaPredicted RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 ATP13A4Q4VNC1 1196 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 OTUD1Q5VV17 481 aaPredicted RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 TXNRD3NBQ6F5E7 133 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 RBM23Q86U06 439 aaKnown RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 TTC13Q8NBP0 860 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 FAM71BQ8TC56 605 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 RAPGEF5Q92565 580 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 RUNDC3BQ96NL0 473 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 FRMD8P1Q9BZ68 369 aaPredicted RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 ARHGEF38Q9NXL2 777 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 SMARCAL1Q9NZC9 954 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 MTCL1Q9Y4B5 1905 aaKnown RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 ZNF197O14709 1029 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 PER2O15055 1255 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 F11P03951 625 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 GABRR2P28476 465 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 CDKN2BP42772 138 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 ATXN1P54253 815 aaKnown RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 PITX1P78337 314 aaPredicted RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 PPP6R3Q5H9R7 873 aaPredicted RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 MFSD7Q6UXD7 560 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 CYP4V2Q6ZWL3 525 aaPredicted RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 PDZD4Q76G19 769 aaPredicted RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 GPR161Q8N6U8 529 aaKnown RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 CCDC185Q8N715 623 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 ATP6V0D2Q8N8Y2 350 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 EPAS1Q99814 870 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 PRKD2Q9BZL6 878 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 OSBPL2Q9H1P3 480 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 ZNF576Q9H609 170 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 NSUN3Q9H649 340 aaKnown RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 KLHL11Q9NVR0 708 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 DONSONQ9NYP3 566 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 CALCOCO1Q9P1Z2 691 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 STIM2Q9P246 746 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 FEZ2Q9UHY8 353 aaPredicted RBP14.2□□□□□ -0.14
VAPB-202ENST00000395802 RASAL2Q9UJF2 1139 aa14.2□□□□□ -0.14
VAPB-202ENST00000395802 H3BRJ5 948 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 CCL16O15467 120 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 EPCAMP16422 314 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 L1CAMP32004 1257 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 NRIP1P48552 1158 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 HARS2P49590 506 aaKnown RBP14.19□□□□□ -0.14
VAPB-202ENST00000395802 TAZQ16635 292 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 ARHGAP15Q53QZ3 475 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 MIB1Q86YT6 1006 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 PLD4Q96BZ4 506 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 BTN2A3PQ96KV6 586 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 C1orf74Q96LT6 269 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 CORO1BQ9BR76 489 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 ADAM33Q9BZ11 813 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 EPC1Q9H2F5 836 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 ATXN3LQ9H3M9 355 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 CCSER2Q9H7U1 834 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 SFXN1Q9H9B4 322 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 NUDT5Q9UKK9 219 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 CHD9Q3L8U1 2897 aa14.19□□□□□ -0.14
VAPB-202ENST00000395802 CHD7Q9P2D1 2997 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 hCG_1818297A0A087WSY0 165 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 SLC12A8A0AV02 714 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 PI4K2BG5E9Z4 385 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 OAS1P00973 400 aaKnown RBP14.18□□□□□ -0.14
VAPB-202ENST00000395802 HCAR3P49019 387 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 PGFP49763 221 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 ARSEP51690 589 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 EPHA5P54756 1037 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 DPYSL3Q14195 570 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms