RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 VAV1P15498 845 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 AKAP5P24588 427 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 LMO2P25791 158 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 SERPINB3P29508 390 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 EPHX2P34913 555 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 CCNG1P51959 295 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 ZBTB16Q05516 673 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 CCDC33Q8N5R6 958 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 ARMC2Q8NEN0 867 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 NSL1Q96IY1 281 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 OLFM3Q96PB7 478 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 TRIM56Q9BRZ2 755 aaKnown RBP12.72□□□□□ -0.37
RFC5-201ENST00000392542 ARL8BQ9NVJ2 186 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 GEMIN8Q9NWZ8 242 aaKnown RBP12.72□□□□□ -0.37
RFC5-201ENST00000392542 GDAP2Q9NXN4 497 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 SLC5A4Q9NY91 659 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 SLC45A1Q9Y2W3 748 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 MFHAS1Q9Y4C4 1052 aa12.72□□□□□ -0.37
RFC5-201ENST00000392542 SMIM35A0A1B0GVV1 85 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 KPNA7A9QM74 516 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 SPTLC1O15269 473 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 CCDC22O60826 627 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 GOT1P17174 413 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 FDFT1P37268 417 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 ARL4AP40617 200 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 GRIA1P42261 906 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 SARNPP82979 210 aaKnown RBP12.71□□□□□ -0.37
RFC5-201ENST00000392542 NBPF20Q3BBV1 942 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 EFHC1Q5JVL4 640 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 IQSEC1Q6DN90 963 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 GPR142Q7Z601 462 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 GPATCH11Q8N954 259 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 SLC2A14Q8TDB8 520 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 SH3TC2Q8TF17 1288 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 TFB1MQ8WVM0 346 aaKnown RBP12.71□□□□□ -0.37
RFC5-201ENST00000392542 HTR3CQ8WXA8 447 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 E2F7Q96AV8 911 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 C7orf26Q96N11 449 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 MIPEPQ99797 713 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 MECRQ9BV79 373 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 SLC13A1Q9BZW2 595 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 DNAI2Q9GZS0 605 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 ABHD16BQ9H3Z7 469 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 CXorf56Q9H5V9 222 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 FBXO6Q9NRD1 293 aaPredicted RBP12.71□□□□□ -0.37
RFC5-201ENST00000392542 SIRPGQ9P1W8 387 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 RCOR3Q9P2K3 495 aaPredicted RBP12.71□□□□□ -0.37
RFC5-201ENST00000392542 FZD10Q9ULW2 581 aa12.71□□□□□ -0.37
RFC5-201ENST00000392542 A0A0A0MRY4 1105 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 BTBD19C9JJ37 291 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 SMIM10L2AP0DMW4 78 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 SMIM10L2BP0DMW5 78 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 MYL2P10916 166 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 CYP2C9P11712 490 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 AXLP30530 894 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 PNPLA4P41247 253 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 MATKP42679 507 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 SULT1E1P49888 294 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 GRB14Q14449 540 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 KRT72Q14CN4 511 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 ANKRD20A2Q5SQ80 823 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 ANKRD20A1Q5TYW2 823 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 ANKRD20A3Q5VUR7 823 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 FAM91A1Q658Y4 838 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 STEAP4Q687X5 459 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 DENND5BQ6ZUT9 1274 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 CYS1Q717R9 158 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 BZW1Q7L1Q6 419 aaKnown RBP12.71□□□□□ -0.38
RFC5-201ENST00000392542 LIMS2Q7Z4I7 341 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 DEFB106AQ8N104 65 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 PYROXD2Q8N2H3 581 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 DEPDC1BQ8WUY9 529 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 OXNAD1Q96HP4 312 aaPredicted RBP12.71□□□□□ -0.38
RFC5-201ENST00000392542 SPATA13Q96N96 652 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 BTBD10Q9BSF8 475 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 TINF2Q9BSI4 451 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 PRDM16Q9HAZ2 1276 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 PCMTD2Q9NV79 361 aa12.71□□□□□ -0.38
RFC5-201ENST00000392542 NKX1-2Q9UD57 310 aaPredicted RBP12.71□□□□□ -0.38
RFC5-201ENST00000392542 NRCAMQ92823 1304 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 HMX2A2RU54 273 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 XPO1O14980 1071 aaKnown RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 ADCY6O43306 1168 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 XPOTO43592 962 aaKnown RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 MLNP12872 115 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 GM2AP17900 193 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 CALB2P22676 271 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 CNTFP26441 200 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 CRHR1P34998 444 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 TAF6P49848 677 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 TMPRSS15P98073 1019 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 BST1Q10588 318 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 ZNF618Q5T7W0 954 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 TIFABQ6ZNK6 161 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 FAM131BQ86XD5 332 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 PSTKQ8IV42 348 aaKnown RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 HACE1Q8IYU2 909 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms